RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ABCA5Q8WWZ7 1642 aa-2.55□□□□□ -2.82
CCDC38-204ENST00000546816 SMIM2Q9BVW6 85 aa-2.56□□□□□ -2.82
CCDC38-204ENST00000546816 SMIM5Q71RC9 77 aa-2.59□□□□□ -2.82
CCDC38-204ENST00000546816 PRXQ9BXM0 1461 aa-2.59□□□□□ -2.82
CCDC38-204ENST00000546816 SZT2Q5T011 3432 aa-2.6□□□□□ -2.83
CCDC38-204ENST00000546816 DCHS1Q96JQ0 3298 aa-2.61□□□□□ -2.83
CCDC38-204ENST00000546816 TRPM2O94759 1503 aa-2.63□□□□□ -2.83
CCDC38-204ENST00000546816 WDFY4Q6ZS81 3184 aa-2.64□□□□□ -2.83
CCDC38-204ENST00000546816 CEP250Q9BV73 2442 aa-2.65□□□□□ -2.83
CCDC38-204ENST00000546816 MUC3AQ02505 3323 aa-2.65□□□□□ -2.83
CCDC38-204ENST00000546816 IQGAP1P46940 1657 aa-2.66□□□□□ -2.83
CCDC38-204ENST00000546816 NRXN3Q9Y4C0 1643 aa-2.67□□□□□ -2.84
CCDC38-204ENST00000546816 EP400Q96L91 3159 aa-2.67□□□□□ -2.84
CCDC38-204ENST00000546816 CLTCL1P53675 1640 aa-2.68□□□□□ -2.84
CCDC38-204ENST00000546816 ADCY10Q96PN6 1610 aa-2.68□□□□□ -2.84
CCDC38-204ENST00000546816 DDX60Q8IY21 1712 aaKnown RBP-2.68□□□□□ -2.84
CCDC38-204ENST00000546816 NFAT5O94916 1531 aa-2.68□□□□□ -2.84
CCDC38-204ENST00000546816 ABCC8Q09428 1581 aa-2.72□□□□□ -2.84
CCDC38-204ENST00000546816 DNAH14Q0VDD8 3507 aa-2.73□□□□□ -2.85
CCDC38-204ENST00000546816 CMC2Q9NRP2 79 aa-2.74□□□□□ -2.85
CCDC38-204ENST00000546816 FANCD2Q9BXW9 1451 aa-2.74□□□□□ -2.85
CCDC38-204ENST00000546816 NDUFA1O15239 70 aa-2.78□□□□□ -2.85
CCDC38-204ENST00000546816 MKI67P46013 3256 aaKnown RBP-2.78□□□□□ -2.86
CCDC38-204ENST00000546816 CFAP47Q6ZTR5 3102 aa-2.82□□□□□ -2.86
CCDC38-204ENST00000546816 SMIM31A0A1B0GVY4 71 aa-2.88□□□□□ -2.87
CCDC38-204ENST00000546816 LOC400499M0QZD8 3231 aa-2.9□□□□□ -2.87
CCDC38-204ENST00000546816 TOMM7Q9P0U1 55 aa-2.94□□□□□ -2.88
CCDC38-204ENST00000546816 USP34Q70CQ2 3546 aa-2.94□□□□□ -2.88
CCDC38-204ENST00000546816 DNAH12Q6ZR08 3092 aa-2.97□□□□□ -2.88
CCDC38-204ENST00000546816 VCANP13611 3396 aa-2.97□□□□□ -2.88
CCDC38-204ENST00000546816 LINC01590Q5TEZ4 76 aa-2.97□□□□□ -2.88
CCDC38-204ENST00000546816 UNC80Q8N2C7 3258 aa-2.98□□□□□ -2.89
CCDC38-204ENST00000546816 RHPN1-AS1Q9BWJ2 59 aa-3□□□□□ -2.89
CCDC38-204ENST00000546816 XIRP2A4UGR9 3374 aa-3.01□□□□□ -2.89
CCDC38-204ENST00000546816 TTTY10Q9BZA0 68 aa-3.03□□□□□ -2.89
CCDC38-204ENST00000546816 DEFB133Q30KQ1 61 aa-3.06□□□□□ -2.9
CCDC38-204ENST00000546816 CENPFP49454 3210 aa-3.08□□□□□ -2.9
CCDC38-204ENST00000546816 ASPMQ8IZT6 3477 aa-3.09□□□□□ -2.9
CCDC38-204ENST00000546816 KRTAP19-2Q3LHN2 52 aa-3.11□□□□□ -2.91
CCDC38-204ENST00000546816 ERICH3Q5RHP9 1530 aa-3.12□□□□□ -2.91
CCDC38-204ENST00000546816 DUOX1Q9NRD9 1551 aa-3.12□□□□□ -2.91
CCDC38-204ENST00000546816 SAMD9LQ8IVG5 1584 aa-3.13□□□□□ -2.91
CCDC38-204ENST00000546816 A0A096LNI7 61 aa-3.16□□□□□ -2.92
CCDC38-204ENST00000546816 SNRPGP15A8MWD9 76 aa-3.17□□□□□ -2.92
CCDC38-204ENST00000546816 HTN1P15515 57 aa-3.19□□□□□ -2.92
CCDC38-204ENST00000546816 RPL39P62891 51 aaKnown RBP-3.19□□□□□ -2.92
CCDC38-204ENST00000546816 CDH23Q9H251 3354 aa-3.21□□□□□ -2.92
CCDC38-204ENST00000546816 CD52P31358 61 aa-3.25□□□□□ -2.93
CCDC38-204ENST00000546816 DEFB124Q8NES8 71 aa-3.27□□□□□ -2.93
CCDC38-204ENST00000546816 BRCA2P51587 3418 aa-3.27□□□□□ -2.93
CCDC38-204ENST00000546816 TOP2AP11388 1531 aaKnown RBP-3.3□□□□□ -2.94
CCDC38-204ENST00000546816 VPS13AQ96RL7 3174 aa-3.32□□□□□ -2.94
CCDC38-204ENST00000546816 RPL39LQ96EH5 51 aaKnown RBP-3.32□□□□□ -2.94
CCDC38-204ENST00000546816 IQGAP2Q13576 1575 aa-3.34□□□□□ -2.94
CCDC38-204ENST00000546816 ATP7AQ04656 1500 aa-3.38□□□□□ -2.95
CCDC38-204ENST00000546816 MROH2BQ7Z745 1585 aa-3.41□□□□□ -2.96
CCDC38-204ENST00000546816 TOMM5Q8N4H5 51 aa-3.45□□□□□ -2.96
CCDC38-204ENST00000546816 DEFB104AQ8WTQ1 72 aa-3.5□□□□□ -2.97
CCDC38-204ENST00000546816 UTRNP46939 3433 aa-3.57□□□□□ -2.98
CCDC38-204ENST00000546816 H3BUX3 64 aa-3.61□□□□□ -2.99
CCDC38-204ENST00000546816 LINC01556Q5JQF7 62 aa-3.67□□□□□ -3
CCDC38-204ENST00000546816 K7EIM0 57 aa-3.79□□□□□ -3.02
CCDC38-204ENST00000546816 GOLGB1Q14789 3259 aaKnown RBP-3.87□□□□□ -3.03
CCDC38-204ENST00000546816 ARHGAP5-AS1Q96IT6 56 aa-3.94□□□□□ -3.04
CCDC38-204ENST00000546816 PRCDQ00LT1 54 aa-4.03□□□□□ -3.05
CCDC38-204ENST00000546816 APELAP0DMC3 54 aa-4.05□□□□□ -3.06
CCDC38-204ENST00000546816 A0A096LPF7 62 aa-4.07□□□□□ -3.06
CCDC38-204ENST00000546816 GCC2Q8IWJ2 1684 aa-4.08□□□□□ -3.06
CCDC38-204ENST00000546816 SNRPGP62308 76 aaKnown RBP-4.1□□□□□ -3.07
CCDC38-204ENST00000546816 TMEM167AQ8TBQ9 72 aa-4.16□□□□□ -3.08
CCDC38-204ENST00000546816 HTN3P15516 51 aa-4.37□□□□□ -3.11
CCDC38-204ENST00000546816 RPL39P5Q59GN2 51 aa-4.4□□□□□ -3.11
CCDC38-204ENST00000546816 DEFB108AA8MXU0 73 aa-4.5□□□□□ -3.13
CCDC38-204ENST00000546816 H3BSH0 61 aa-4.5□□□□□ -3.13
CCDC38-204ENST00000546816 Q9Y3F1 56 aa-4.5□□□□□ -3.13
CCDC38-204ENST00000546816 COX14Q96I36 57 aa-4.84□□□□□ -3.18
CCDC38-204ENST00000546816 DEFB108BQ8NET1 73 aa-5.01□□□□□ -3.21
CCDC38-204ENST00000546816 STATHP02808 62 aa-5.22□□□□□ -3.25
Retrieved 78 of 20,778 RNA–protein pairs in 50.4 ms