RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
KDM1B-203ENST00000546309 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
KDM1B-203ENST00000546309 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
KDM1B-203ENST00000546309 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
KDM1B-203ENST00000546309 SPRR2DP22532 72 aa3.08□□□□□ -1.92
KDM1B-203ENST00000546309 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
KDM1B-203ENST00000546309 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
KDM1B-203ENST00000546309 LCE3BQ5TA77 95 aa3□□□□□ -1.93
KDM1B-203ENST00000546309 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
KDM1B-203ENST00000546309 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
KDM1B-203ENST00000546309 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
KDM1B-203ENST00000546309 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
KDM1B-203ENST00000546309 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
KDM1B-203ENST00000546309 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
KDM1B-203ENST00000546309 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.95
KDM1B-203ENST00000546309 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
KDM1B-203ENST00000546309 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
KDM1B-203ENST00000546309 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
KDM1B-203ENST00000546309 MT1EP04732 61 aa2.79□□□□□ -1.96
KDM1B-203ENST00000546309 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
KDM1B-203ENST00000546309 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
KDM1B-203ENST00000546309 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
KDM1B-203ENST00000546309 MT1LQ93083 61 aa2.73□□□□□ -1.97
KDM1B-203ENST00000546309 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
KDM1B-203ENST00000546309 MT4P47944 62 aa2.71□□□□□ -1.98
KDM1B-203ENST00000546309 MT1GP13640 62 aa2.7□□□□□ -1.98
KDM1B-203ENST00000546309 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
KDM1B-203ENST00000546309 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
KDM1B-203ENST00000546309 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
KDM1B-203ENST00000546309 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
KDM1B-203ENST00000546309 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
KDM1B-203ENST00000546309 MT1MQ8N339 61 aa2.64□□□□□ -1.99
KDM1B-203ENST00000546309 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
KDM1B-203ENST00000546309 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
KDM1B-203ENST00000546309 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
KDM1B-203ENST00000546309 NDUFAF8A1L188 74 aa2.58□□□□□ -2
KDM1B-203ENST00000546309 KRTAP4-7Q9BYR0 210 aa2.58□□□□□ -2
KDM1B-203ENST00000546309 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
KDM1B-203ENST00000546309 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
KDM1B-203ENST00000546309 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
KDM1B-203ENST00000546309 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
KDM1B-203ENST00000546309 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
KDM1B-203ENST00000546309 LOC100996750A0A140TA64 210 aa2.44□□□□□ -2.02
KDM1B-203ENST00000546309 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
KDM1B-203ENST00000546309 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
KDM1B-203ENST00000546309 MT1AP04731 61 aa2.34□□□□□ -2.03
KDM1B-203ENST00000546309 INE1O15225 51 aa2.3□□□□□ -2.04
KDM1B-203ENST00000546309 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
KDM1B-203ENST00000546309 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
KDM1B-203ENST00000546309 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
KDM1B-203ENST00000546309 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
KDM1B-203ENST00000546309 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
KDM1B-203ENST00000546309 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
KDM1B-203ENST00000546309 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
KDM1B-203ENST00000546309 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
KDM1B-203ENST00000546309 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
KDM1B-203ENST00000546309 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
KDM1B-203ENST00000546309 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
KDM1B-203ENST00000546309 MT3P25713 68 aa2.13□□□□□ -2.07
KDM1B-203ENST00000546309 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
KDM1B-203ENST00000546309 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
KDM1B-203ENST00000546309 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
KDM1B-203ENST00000546309 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
KDM1B-203ENST00000546309 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
KDM1B-203ENST00000546309 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
KDM1B-203ENST00000546309 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
KDM1B-203ENST00000546309 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
KDM1B-203ENST00000546309 PRM1P04553 51 aa1.68□□□□□ -2.14
KDM1B-203ENST00000546309 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
KDM1B-203ENST00000546309 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
KDM1B-203ENST00000546309 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
KDM1B-203ENST00000546309 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
KDM1B-203ENST00000546309 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
KDM1B-203ENST00000546309 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
KDM1B-203ENST00000546309 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
KDM1B-203ENST00000546309 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
KDM1B-203ENST00000546309 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 17.4 ms