RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
YBX3-218ENST00000546298 COA5Q86WW8 74 aa3.61□□□□□ -1.83
YBX3-218ENST00000546298 PSPHP1O15172 72 aa3.6□□□□□ -1.83
YBX3-218ENST00000546298 PRR15LQ9BU68 103 aa3.56□□□□□ -1.84
YBX3-218ENST00000546298 A0A0D9SG42 100 aa3.55□□□□□ -1.84
YBX3-218ENST00000546298 A0A1B0GU33 70 aa3.53□□□□□ -1.84
YBX3-218ENST00000546298 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
YBX3-218ENST00000546298 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
YBX3-218ENST00000546298 A6NED7 52 aa3.52□□□□□ -1.85
YBX3-218ENST00000546298 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
YBX3-218ENST00000546298 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
YBX3-218ENST00000546298 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
YBX3-218ENST00000546298 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
YBX3-218ENST00000546298 MT1EP04732 61 aa3.48□□□□□ -1.85
YBX3-218ENST00000546298 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
YBX3-218ENST00000546298 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
YBX3-218ENST00000546298 A0A1B0GU69 56 aa3.45□□□□□ -1.86
YBX3-218ENST00000546298 A8MU10 97 aa3.45□□□□□ -1.86
YBX3-218ENST00000546298 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
YBX3-218ENST00000546298 MT1GP13640 62 aa3.41□□□□□ -1.86
YBX3-218ENST00000546298 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
YBX3-218ENST00000546298 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
YBX3-218ENST00000546298 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
YBX3-218ENST00000546298 TNP1P09430 55 aa3.36□□□□□ -1.87
YBX3-218ENST00000546298 UQCR11O14957 56 aa3.32□□□□□ -1.88
YBX3-218ENST00000546298 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
YBX3-218ENST00000546298 MT1MQ8N339 61 aa3.32□□□□□ -1.88
YBX3-218ENST00000546298 MT1LQ93083 61 aa3.32□□□□□ -1.88
YBX3-218ENST00000546298 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
YBX3-218ENST00000546298 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
YBX3-218ENST00000546298 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
YBX3-218ENST00000546298 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
YBX3-218ENST00000546298 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
YBX3-218ENST00000546298 MT4P47944 62 aa3.24□□□□□ -1.89
YBX3-218ENST00000546298 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
YBX3-218ENST00000546298 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
YBX3-218ENST00000546298 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
YBX3-218ENST00000546298 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
YBX3-218ENST00000546298 K7ERS5 55 aa3.14□□□□□ -1.91
YBX3-218ENST00000546298 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
YBX3-218ENST00000546298 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
YBX3-218ENST00000546298 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
YBX3-218ENST00000546298 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
YBX3-218ENST00000546298 ROMO1P60602 79 aa3.05□□□□□ -1.92
YBX3-218ENST00000546298 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
YBX3-218ENST00000546298 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
YBX3-218ENST00000546298 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
YBX3-218ENST00000546298 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
YBX3-218ENST00000546298 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
YBX3-218ENST00000546298 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
YBX3-218ENST00000546298 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
YBX3-218ENST00000546298 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
YBX3-218ENST00000546298 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
YBX3-218ENST00000546298 MT1AP04731 61 aa2.84□□□□□ -1.95
YBX3-218ENST00000546298 MT3P25713 68 aa2.83□□□□□ -1.96
YBX3-218ENST00000546298 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
YBX3-218ENST00000546298 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
YBX3-218ENST00000546298 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
YBX3-218ENST00000546298 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
YBX3-218ENST00000546298 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
YBX3-218ENST00000546298 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
YBX3-218ENST00000546298 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
YBX3-218ENST00000546298 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
YBX3-218ENST00000546298 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
YBX3-218ENST00000546298 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
YBX3-218ENST00000546298 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
YBX3-218ENST00000546298 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
YBX3-218ENST00000546298 INE1O15225 51 aa2.36□□□□□ -2.03
YBX3-218ENST00000546298 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
YBX3-218ENST00000546298 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
YBX3-218ENST00000546298 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
YBX3-218ENST00000546298 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
YBX3-218ENST00000546298 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
YBX3-218ENST00000546298 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
YBX3-218ENST00000546298 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
YBX3-218ENST00000546298 PRM1P04553 51 aa1.6□□□□□ -2.15
YBX3-218ENST00000546298 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
YBX3-218ENST00000546298 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 97.1 ms