RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
CPSF7-224ENST00000544990 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
CPSF7-224ENST00000544990 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
CPSF7-224ENST00000544990 KMT2DO14686 5537 aa2.95□□□□□ -1.94
CPSF7-224ENST00000544990 A0A1B0GU33 70 aa2.95□□□□□ -1.94
CPSF7-224ENST00000544990 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
CPSF7-224ENST00000544990 Q1T7F1 81 aa2.94□□□□□ -1.94
CPSF7-224ENST00000544990 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CPSF7-224ENST00000544990 A0A1B0GU69 56 aa2.93□□□□□ -1.94
CPSF7-224ENST00000544990 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
CPSF7-224ENST00000544990 A0A0D9SG42 100 aa2.92□□□□□ -1.94
CPSF7-224ENST00000544990 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
CPSF7-224ENST00000544990 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
CPSF7-224ENST00000544990 SPRR2EP22531 72 aa2.91□□□□□ -1.94
CPSF7-224ENST00000544990 SPRR2BP35325 72 aa2.91□□□□□ -1.94
CPSF7-224ENST00000544990 SPRR2AP35326 72 aa2.91□□□□□ -1.94
CPSF7-224ENST00000544990 PSPHP1O15172 72 aa2.89□□□□□ -1.95
CPSF7-224ENST00000544990 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
CPSF7-224ENST00000544990 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
CPSF7-224ENST00000544990 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
CPSF7-224ENST00000544990 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
CPSF7-224ENST00000544990 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
CPSF7-224ENST00000544990 SPRR2DP22532 72 aa2.81□□□□□ -1.96
CPSF7-224ENST00000544990 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
CPSF7-224ENST00000544990 A6NED7 52 aa2.76□□□□□ -1.97
CPSF7-224ENST00000544990 UQCR11O14957 56 aa2.76□□□□□ -1.97
CPSF7-224ENST00000544990 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
CPSF7-224ENST00000544990 TNP1P09430 55 aa2.74□□□□□ -1.97
CPSF7-224ENST00000544990 MT1EP04732 61 aa2.72□□□□□ -1.97
CPSF7-224ENST00000544990 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
CPSF7-224ENST00000544990 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
CPSF7-224ENST00000544990 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
CPSF7-224ENST00000544990 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
CPSF7-224ENST00000544990 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
CPSF7-224ENST00000544990 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
CPSF7-224ENST00000544990 K7ERS5 55 aa2.67□□□□□ -1.98
CPSF7-224ENST00000544990 MT1GP13640 62 aa2.67□□□□□ -1.98
CPSF7-224ENST00000544990 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
CPSF7-224ENST00000544990 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
CPSF7-224ENST00000544990 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
CPSF7-224ENST00000544990 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CPSF7-224ENST00000544990 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
CPSF7-224ENST00000544990 MT1LQ93083 61 aa2.61□□□□□ -1.99
CPSF7-224ENST00000544990 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
CPSF7-224ENST00000544990 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
CPSF7-224ENST00000544990 MT1MQ8N339 61 aa2.59□□□□□ -1.99
CPSF7-224ENST00000544990 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
CPSF7-224ENST00000544990 KRTAP12-3P60328 96 aa2.58□□□□□ -2
CPSF7-224ENST00000544990 ROMO1P60602 79 aa2.56□□□□□ -2
CPSF7-224ENST00000544990 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
CPSF7-224ENST00000544990 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CPSF7-224ENST00000544990 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
CPSF7-224ENST00000544990 MT4P47944 62 aa2.45□□□□□ -2.02
CPSF7-224ENST00000544990 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
CPSF7-224ENST00000544990 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
CPSF7-224ENST00000544990 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
CPSF7-224ENST00000544990 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CPSF7-224ENST00000544990 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
CPSF7-224ENST00000544990 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
CPSF7-224ENST00000544990 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
CPSF7-224ENST00000544990 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
CPSF7-224ENST00000544990 MT1AP04731 61 aa2.23□□□□□ -2.05
CPSF7-224ENST00000544990 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
CPSF7-224ENST00000544990 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
CPSF7-224ENST00000544990 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CPSF7-224ENST00000544990 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
CPSF7-224ENST00000544990 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
CPSF7-224ENST00000544990 INE1O15225 51 aa2.09□□□□□ -2.07
CPSF7-224ENST00000544990 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
CPSF7-224ENST00000544990 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CPSF7-224ENST00000544990 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
CPSF7-224ENST00000544990 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
CPSF7-224ENST00000544990 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CPSF7-224ENST00000544990 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CPSF7-224ENST00000544990 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
CPSF7-224ENST00000544990 PRM1P04553 51 aa1.25□□□□□ -2.21
CPSF7-224ENST00000544990 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CPSF7-224ENST00000544990 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 133.8 ms