RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
CDCA3-209ENST00000544610 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
CDCA3-209ENST00000544610 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CDCA3-209ENST00000544610 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
CDCA3-209ENST00000544610 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
CDCA3-209ENST00000544610 K7ERS5 55 aa2.86□□□□□ -1.95
CDCA3-209ENST00000544610 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
CDCA3-209ENST00000544610 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
CDCA3-209ENST00000544610 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
CDCA3-209ENST00000544610 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
CDCA3-209ENST00000544610 LINC01554Q52M75 96 aa2.81□□□□□ -1.96
CDCA3-209ENST00000544610 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
CDCA3-209ENST00000544610 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
CDCA3-209ENST00000544610 A8MU10 97 aa2.8□□□□□ -1.96
CDCA3-209ENST00000544610 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
CDCA3-209ENST00000544610 A0A0D9SG42 100 aa2.79□□□□□ -1.96
CDCA3-209ENST00000544610 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CDCA3-209ENST00000544610 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
CDCA3-209ENST00000544610 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
CDCA3-209ENST00000544610 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
CDCA3-209ENST00000544610 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
CDCA3-209ENST00000544610 SPRR2EP22531 72 aa2.75□□□□□ -1.97
CDCA3-209ENST00000544610 SPRR2BP35325 72 aa2.75□□□□□ -1.97
CDCA3-209ENST00000544610 SPRR2AP35326 72 aa2.75□□□□□ -1.97
CDCA3-209ENST00000544610 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
CDCA3-209ENST00000544610 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
CDCA3-209ENST00000544610 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
CDCA3-209ENST00000544610 MT1XP80297 61 aa2.7□□□□□ -1.98
CDCA3-209ENST00000544610 KRTAP8-1Q8IUC2 63 aa2.69□□□□□ -1.98
CDCA3-209ENST00000544610 ROMO1P60602 79 aa2.68□□□□□ -1.98
CDCA3-209ENST00000544610 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
CDCA3-209ENST00000544610 SPRR2DP22532 72 aa2.66□□□□□ -1.98
CDCA3-209ENST00000544610 TNP1P09430 55 aa2.65□□□□□ -1.99
CDCA3-209ENST00000544610 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
CDCA3-209ENST00000544610 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
CDCA3-209ENST00000544610 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CDCA3-209ENST00000544610 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
CDCA3-209ENST00000544610 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
CDCA3-209ENST00000544610 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
CDCA3-209ENST00000544610 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
CDCA3-209ENST00000544610 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
CDCA3-209ENST00000544610 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
CDCA3-209ENST00000544610 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CDCA3-209ENST00000544610 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
CDCA3-209ENST00000544610 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
CDCA3-209ENST00000544610 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
CDCA3-209ENST00000544610 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
CDCA3-209ENST00000544610 MT1EP04732 61 aa2.4□□□□□ -2.03
CDCA3-209ENST00000544610 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
CDCA3-209ENST00000544610 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
CDCA3-209ENST00000544610 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
CDCA3-209ENST00000544610 MT1GP13640 62 aa2.33□□□□□ -2.04
CDCA3-209ENST00000544610 MT4P47944 62 aa2.33□□□□□ -2.04
CDCA3-209ENST00000544610 MT1LQ93083 61 aa2.32□□□□□ -2.04
CDCA3-209ENST00000544610 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
CDCA3-209ENST00000544610 MT1MQ8N339 61 aa2.3□□□□□ -2.04
CDCA3-209ENST00000544610 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
CDCA3-209ENST00000544610 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CDCA3-209ENST00000544610 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
CDCA3-209ENST00000544610 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
CDCA3-209ENST00000544610 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
CDCA3-209ENST00000544610 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
CDCA3-209ENST00000544610 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CDCA3-209ENST00000544610 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CDCA3-209ENST00000544610 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
CDCA3-209ENST00000544610 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
CDCA3-209ENST00000544610 MT1AP04731 61 aa2□□□□□ -2.09
CDCA3-209ENST00000544610 LCE1CQ5T751 118 aa2□□□□□ -2.09
CDCA3-209ENST00000544610 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
CDCA3-209ENST00000544610 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CDCA3-209ENST00000544610 INE1O15225 51 aa1.87□□□□□ -2.11
CDCA3-209ENST00000544610 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CDCA3-209ENST00000544610 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CDCA3-209ENST00000544610 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CDCA3-209ENST00000544610 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
CDCA3-209ENST00000544610 PRM1P04553 51 aa1.34□□□□□ -2.19
CDCA3-209ENST00000544610 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
CDCA3-209ENST00000544610 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 78.9 ms