RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
CPSF7-222ENST00000544585 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
CPSF7-222ENST00000544585 CHKB-CPT1BH3BT56 60 aa2.68□□□□□ -1.98
CPSF7-222ENST00000544585 MT1BP07438 61 aa2.68□□□□□ -1.98
CPSF7-222ENST00000544585 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
CPSF7-222ENST00000544585 LOC101927531A0A1B0GV80 90 aa2.66□□□□□ -1.98
CPSF7-222ENST00000544585 MRPL34Q9BQ48 92 aaKnown RBP2.66□□□□□ -1.98
CPSF7-222ENST00000544585 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
CPSF7-222ENST00000544585 SPRR2EP22531 72 aa2.64□□□□□ -1.99
CPSF7-222ENST00000544585 SPRR2BP35325 72 aa2.64□□□□□ -1.99
CPSF7-222ENST00000544585 SPRR2AP35326 72 aa2.64□□□□□ -1.99
CPSF7-222ENST00000544585 COA5Q86WW8 74 aa2.63□□□□□ -1.99
CPSF7-222ENST00000544585 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
CPSF7-222ENST00000544585 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
CPSF7-222ENST00000544585 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
CPSF7-222ENST00000544585 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
CPSF7-222ENST00000544585 LINC01558Q9Y6Z2 57 aa2.59□□□□□ -1.99
CPSF7-222ENST00000544585 ACYP2P14621 99 aa2.58□□□□□ -2
CPSF7-222ENST00000544585 CRIPTQ9P021 101 aa2.57□□□□□ -2
CPSF7-222ENST00000544585 SPRR2DP22532 72 aa2.56□□□□□ -2
CPSF7-222ENST00000544585 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
CPSF7-222ENST00000544585 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
CPSF7-222ENST00000544585 PP632Q6XCG6 107 aa2.55□□□□□ -2
CPSF7-222ENST00000544585 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
CPSF7-222ENST00000544585 DMAC1Q96GE9 116 aa2.55□□□□□ -2
CPSF7-222ENST00000544585 S4R3F8 94 aa2.55□□□□□ -2
CPSF7-222ENST00000544585 ROMO1P60602 79 aa2.53□□□□□ -2
CPSF7-222ENST00000544585 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
CPSF7-222ENST00000544585 A0A1B0GU69 56 aa2.5□□□□□ -2.01
CPSF7-222ENST00000544585 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
CPSF7-222ENST00000544585 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
CPSF7-222ENST00000544585 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
CPSF7-222ENST00000544585 UQCR11O14957 56 aa2.46□□□□□ -2.02
CPSF7-222ENST00000544585 MIR22HGQ0VDD5 57 aa2.46□□□□□ -2.02
CPSF7-222ENST00000544585 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CPSF7-222ENST00000544585 MT1XP80297 61 aa2.45□□□□□ -2.02
CPSF7-222ENST00000544585 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CPSF7-222ENST00000544585 H0YAA0 97 aa2.42□□□□□ -2.02
CPSF7-222ENST00000544585 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
CPSF7-222ENST00000544585 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
CPSF7-222ENST00000544585 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CPSF7-222ENST00000544585 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
CPSF7-222ENST00000544585 M0QZ58 72 aa2.29□□□□□ -2.04
CPSF7-222ENST00000544585 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
CPSF7-222ENST00000544585 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
CPSF7-222ENST00000544585 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
CPSF7-222ENST00000544585 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
CPSF7-222ENST00000544585 MT4P47944 62 aa2.24□□□□□ -2.05
CPSF7-222ENST00000544585 A0A0D9SG42 100 aa2.2□□□□□ -2.06
CPSF7-222ENST00000544585 MT1GP13640 62 aa2.2□□□□□ -2.06
CPSF7-222ENST00000544585 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
CPSF7-222ENST00000544585 MT1EP04732 61 aa2.19□□□□□ -2.06
CPSF7-222ENST00000544585 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
CPSF7-222ENST00000544585 INE1O15225 51 aa2.15□□□□□ -2.07
CPSF7-222ENST00000544585 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CPSF7-222ENST00000544585 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CPSF7-222ENST00000544585 MT1MQ8N339 61 aa2.11□□□□□ -2.07
CPSF7-222ENST00000544585 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
CPSF7-222ENST00000544585 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
CPSF7-222ENST00000544585 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CPSF7-222ENST00000544585 MT1LQ93083 61 aa2.06□□□□□ -2.08
CPSF7-222ENST00000544585 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
CPSF7-222ENST00000544585 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
CPSF7-222ENST00000544585 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
CPSF7-222ENST00000544585 TNP1P09430 55 aa1.96□□□□□ -2.1
CPSF7-222ENST00000544585 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CPSF7-222ENST00000544585 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
CPSF7-222ENST00000544585 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
CPSF7-222ENST00000544585 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
CPSF7-222ENST00000544585 MT1AP04731 61 aa1.76□□□□□ -2.13
CPSF7-222ENST00000544585 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
CPSF7-222ENST00000544585 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CPSF7-222ENST00000544585 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
CPSF7-222ENST00000544585 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
CPSF7-222ENST00000544585 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
CPSF7-222ENST00000544585 PRM1P04553 51 aa1.19□□□□□ -2.22
CPSF7-222ENST00000544585 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CPSF7-222ENST00000544585 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms