RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
SEMA4D-224ENST00000544513 A0A0D9SG42 100 aa5.01□□□□□ -1.61
SEMA4D-224ENST00000544513 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
SEMA4D-224ENST00000544513 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
SEMA4D-224ENST00000544513 MT1MQ8N339 61 aa4.96□□□□□ -1.62
SEMA4D-224ENST00000544513 MT4P47944 62 aa4.95□□□□□ -1.62
SEMA4D-224ENST00000544513 A6NED7 52 aa4.93□□□□□ -1.62
SEMA4D-224ENST00000544513 MIR22HGQ0VDD5 57 aa4.93□□□□□ -1.62
SEMA4D-224ENST00000544513 MT1LQ93083 61 aa4.92□□□□□ -1.62
SEMA4D-224ENST00000544513 A8MU10 97 aa4.9□□□□□ -1.63
SEMA4D-224ENST00000544513 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
SEMA4D-224ENST00000544513 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
SEMA4D-224ENST00000544513 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
SEMA4D-224ENST00000544513 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
SEMA4D-224ENST00000544513 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SEMA4D-224ENST00000544513 K7ERS5 55 aa4.82□□□□□ -1.64
SEMA4D-224ENST00000544513 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
SEMA4D-224ENST00000544513 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
SEMA4D-224ENST00000544513 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
SEMA4D-224ENST00000544513 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
SEMA4D-224ENST00000544513 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
SEMA4D-224ENST00000544513 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
SEMA4D-224ENST00000544513 TNP1P09430 55 aa4.7□□□□□ -1.66
SEMA4D-224ENST00000544513 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
SEMA4D-224ENST00000544513 H3BS24 57 aa4.68□□□□□ -1.66
SEMA4D-224ENST00000544513 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
SEMA4D-224ENST00000544513 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
SEMA4D-224ENST00000544513 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
SEMA4D-224ENST00000544513 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
SEMA4D-224ENST00000544513 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
SEMA4D-224ENST00000544513 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
SEMA4D-224ENST00000544513 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
SEMA4D-224ENST00000544513 ROMO1P60602 79 aa4.52□□□□□ -1.69
SEMA4D-224ENST00000544513 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
SEMA4D-224ENST00000544513 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
SEMA4D-224ENST00000544513 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
SEMA4D-224ENST00000544513 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
SEMA4D-224ENST00000544513 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
SEMA4D-224ENST00000544513 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
SEMA4D-224ENST00000544513 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
SEMA4D-224ENST00000544513 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
SEMA4D-224ENST00000544513 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
SEMA4D-224ENST00000544513 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
SEMA4D-224ENST00000544513 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
SEMA4D-224ENST00000544513 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
SEMA4D-224ENST00000544513 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
SEMA4D-224ENST00000544513 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
SEMA4D-224ENST00000544513 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
SEMA4D-224ENST00000544513 MT1AP04731 61 aa4.18□□□□□ -1.74
SEMA4D-224ENST00000544513 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
SEMA4D-224ENST00000544513 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
SEMA4D-224ENST00000544513 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
SEMA4D-224ENST00000544513 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
SEMA4D-224ENST00000544513 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
SEMA4D-224ENST00000544513 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
SEMA4D-224ENST00000544513 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SEMA4D-224ENST00000544513 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SEMA4D-224ENST00000544513 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
SEMA4D-224ENST00000544513 MT3P25713 68 aa3.83□□□□□ -1.8
SEMA4D-224ENST00000544513 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SEMA4D-224ENST00000544513 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
SEMA4D-224ENST00000544513 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SEMA4D-224ENST00000544513 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SEMA4D-224ENST00000544513 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
SEMA4D-224ENST00000544513 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
SEMA4D-224ENST00000544513 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
SEMA4D-224ENST00000544513 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SEMA4D-224ENST00000544513 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
SEMA4D-224ENST00000544513 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SEMA4D-224ENST00000544513 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
SEMA4D-224ENST00000544513 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
SEMA4D-224ENST00000544513 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SEMA4D-224ENST00000544513 INE1O15225 51 aa2.64□□□□□ -1.99
SEMA4D-224ENST00000544513 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SEMA4D-224ENST00000544513 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SEMA4D-224ENST00000544513 PRM1P04553 51 aa2.32□□□□□ -2.04
SEMA4D-224ENST00000544513 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SEMA4D-224ENST00000544513 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 46.5 ms