RNA–Protein interactions for RNA: ENST00000544057.1

PHOX2A-202, Transcript of paired like homeobox 2A, humanhuman

TSL 3

Gene PHOX2A, Length 605 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-202ENST00000544057 LCE5AQ5TCM9 118 aa10.72□□□□□ -0.69
PHOX2A-202ENST00000544057 LCE3BQ5TA77 95 aa10.67□□□□□ -0.7
PHOX2A-202ENST00000544057 KRTAP25-1Q3LHN0 102 aa10.66□□□□□ -0.7
PHOX2A-202ENST00000544057 MT1GP13640 62 aa10.59□□□□□ -0.71
PHOX2A-202ENST00000544057 PP632Q6XCG6 107 aa10.54□□□□□ -0.72
PHOX2A-202ENST00000544057 MT1LQ93083 61 aa10.48□□□□□ -0.73
PHOX2A-202ENST00000544057 KRTAP12-3P60328 96 aa10.43□□□□□ -0.74
PHOX2A-202ENST00000544057 CDC42SE1Q9NRR8 79 aa10.42□□□□□ -0.74
PHOX2A-202ENST00000544057 DSTQ03001 7570 aaKnown RBP10.35□□□□□ -0.75
PHOX2A-202ENST00000544057 MT1MQ8N339 61 aa10.34□□□□□ -0.75
PHOX2A-202ENST00000544057 KRTAP23-1A1A580 65 aa10.33□□□□□ -0.76
PHOX2A-202ENST00000544057 ROMO1P60602 79 aa10.24□□□□□ -0.77
PHOX2A-202ENST00000544057 KRTAP19-4Q3LI73 84 aa10.02□□□□□ -0.81
PHOX2A-202ENST00000544057 KRTAP4-3Q9BYR4 195 aa10.01□□□□□ -0.81
PHOX2A-202ENST00000544057 KRTAP4-7Q9BYR0 210 aa9.91□□□□□ -0.82
PHOX2A-202ENST00000544057 KRTAP15-1Q3LI76 137 aa9.9□□□□□ -0.82
PHOX2A-202ENST00000544057 LCE4AQ5TA78 99 aa9.8□□□□□ -0.84
PHOX2A-202ENST00000544057 KRTAP4-9Q9BYQ8 210 aa9.76□□□□□ -0.85
PHOX2A-202ENST00000544057 BRK1Q8WUW1 75 aa9.7□□□□□ -0.86
PHOX2A-202ENST00000544057 LCE3CQ5T5A8 94 aa9.64□□□□□ -0.87
PHOX2A-202ENST00000544057 KRTAP5-4Q6L8H1 288 aa9.64□□□□□ -0.87
PHOX2A-202ENST00000544057 LCE1DQ5T752 114 aa9.61□□□□□ -0.87
PHOX2A-202ENST00000544057 MT4P47944 62 aa9.56□□□□□ -0.88
PHOX2A-202ENST00000544057 HMCN1Q96RW7 5635 aa9.45□□□□□ -0.9
PHOX2A-202ENST00000544057 KRTAP5-5Q701N2 237 aaPredicted RBP9.44□□□□□ -0.9
PHOX2A-202ENST00000544057 LOC100996750A0A140TA64 210 aa9.38□□□□□ -0.91
PHOX2A-202ENST00000544057 KRTAP4-6Q9BYQ5 205 aa9.31□□□□□ -0.92
PHOX2A-202ENST00000544057 KRTAP12-4P60329 112 aa9.2□□□□□ -0.94
PHOX2A-202ENST00000544057 PMAIP1Q13794 54 aa9.18□□□□□ -0.94
PHOX2A-202ENST00000544057 GPR98Q8WXG9 6306 aa9.17□□□□□ -0.94
PHOX2A-202ENST00000544057 SPRR5A0A1B0GTR4 108 aa9.13□□□□□ -0.95
PHOX2A-202ENST00000544057 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
PHOX2A-202ENST00000544057 KRTAP20-2Q3LI61 65 aa9.06□□□□□ -0.96
PHOX2A-202ENST00000544057 KRTAP9-6A8MVA2 160 aa8.99□□□□□ -0.97
PHOX2A-202ENST00000544057 AHNAK2Q8IVF2 5795 aa8.99□□□□□ -0.97
PHOX2A-202ENST00000544057 SYNE1Q8NF91 8797 aaKnown RBP8.98□□□□□ -0.97
PHOX2A-202ENST00000544057 MT1AP04731 61 aa8.95□□□□□ -0.98
PHOX2A-202ENST00000544057 KRTAP6-1Q3LI64 71 aa8.82□□□□□ -1
PHOX2A-202ENST00000544057 KRTAP5-3Q6L8H2 238 aa8.78□□□□□ -1
PHOX2A-202ENST00000544057 KRTAP5-10Q6L8G5 202 aa8.73□□□□□ -1.01
PHOX2A-202ENST00000544057 PRAC1Q96KF2 57 aa8.65□□□□□ -1.02
PHOX2A-202ENST00000544057 KRTAP9-4Q9BYQ2 154 aa8.62□□□□□ -1.03
PHOX2A-202ENST00000544057 KRTAP5-2Q701N4 177 aa8.51□□□□□ -1.05
PHOX2A-202ENST00000544057 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
PHOX2A-202ENST00000544057 KRTAP6-2Q3LI66 62 aa8.37□□□□□ -1.07
PHOX2A-202ENST00000544057 KRTAP5-7Q6L8G8 165 aa8.37□□□□□ -1.07
PHOX2A-202ENST00000544057 MT3P25713 68 aa8.22□□□□□ -1.09
PHOX2A-202ENST00000544057 KRTAP4-11Q9BYQ6 195 aa8.2□□□□□ -1.1
PHOX2A-202ENST00000544057 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
PHOX2A-202ENST00000544057 KRTAP5-8O75690 187 aa7.88□□□□□ -1.15
PHOX2A-202ENST00000544057 OBSCNQ5VST9 7968 aa7.84□□□□□ -1.15
PHOX2A-202ENST00000544057 KRTAP5-1Q6L8H4 278 aa7.55□□□□□ -1.2
PHOX2A-202ENST00000544057 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
PHOX2A-202ENST00000544057 LCE1EQ5T753 118 aa7.46□□□□□ -1.22
PHOX2A-202ENST00000544057 MUC5ACP98088 5654 aa7.42□□□□□ -1.22
PHOX2A-202ENST00000544057 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
PHOX2A-202ENST00000544057 MUC5BQ9HC84 5762 aaPredicted RBP7.35□□□□□ -1.23
PHOX2A-202ENST00000544057 AHNAKQ09666 5890 aaKnown RBP7.29□□□□□ -1.24
PHOX2A-202ENST00000544057 LCE3DQ9BYE3 92 aa7.05□□□□□ -1.28
PHOX2A-202ENST00000544057 LCE1BQ5T7P3 118 aa6.92□□□□□ -1.3
PHOX2A-202ENST00000544057 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
PHOX2A-202ENST00000544057 LCE1CQ5T751 118 aa6.9□□□□□ -1.3
PHOX2A-202ENST00000544057 LCE3EQ5T5B0 92 aa6.71□□□□□ -1.34
PHOX2A-202ENST00000544057 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
PHOX2A-202ENST00000544057 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.33□□□□□ -1.4
PHOX2A-202ENST00000544057 KRTAP5-11Q6L8G4 156 aa6.2□□□□□ -1.42
PHOX2A-202ENST00000544057 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
PHOX2A-202ENST00000544057 LCE1FQ5T754 118 aa6□□□□□ -1.45
PHOX2A-202ENST00000544057 KRTAP21-2Q3LI59 83 aa5.81□□□□□ -1.48
PHOX2A-202ENST00000544057 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
PHOX2A-202ENST00000544057 INE1O15225 51 aa5.43□□□□□ -1.54
PHOX2A-202ENST00000544057 PHGR1C9JFL3 82 aa5.33□□□□□ -1.56
PHOX2A-202ENST00000544057 KRTAP4-4Q9BYR3 166 aa5.22□□□□□ -1.57
PHOX2A-202ENST00000544057 PRM1P04553 51 aa5.21□□□□□ -1.58
PHOX2A-202ENST00000544057 H3BS24 57 aa5.18□□□□□ -1.58
PHOX2A-202ENST00000544057 MUC19Q7Z5P9 8384 aa4.82□□□□□ -1.64
PHOX2A-202ENST00000544057 KRTAP21-1Q3LI58 79 aa3.89□□□□□ -1.79
PHOX2A-202ENST00000544057 MUC16Q8WXI7 14507 aa3.48□□□□□ -1.85
Retrieved 78 of 20,778 RNA–protein pairs in 62.3 ms