RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 M0QZ58 72 aa4.8□□□□□ -1.64
CACNA2D4-216ENST00000543405 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CACNA2D4-216ENST00000543405 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
CACNA2D4-216ENST00000543405 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
CACNA2D4-216ENST00000543405 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
CACNA2D4-216ENST00000543405 MT4P47944 62 aa4.71□□□□□ -1.66
CACNA2D4-216ENST00000543405 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
CACNA2D4-216ENST00000543405 PRR15LQ9BU68 103 aa4.69□□□□□ -1.66
CACNA2D4-216ENST00000543405 PSPHP1O15172 72 aa4.68□□□□□ -1.66
CACNA2D4-216ENST00000543405 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
CACNA2D4-216ENST00000543405 A0A1B0GU69 56 aa4.65□□□□□ -1.67
CACNA2D4-216ENST00000543405 MT1EP04732 61 aa4.65□□□□□ -1.67
CACNA2D4-216ENST00000543405 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
CACNA2D4-216ENST00000543405 SEC61GP60059 68 aa4.6□□□□□ -1.67
CACNA2D4-216ENST00000543405 A6NED7 52 aa4.55□□□□□ -1.68
CACNA2D4-216ENST00000543405 UQCR11O14957 56 aa4.54□□□□□ -1.68
CACNA2D4-216ENST00000543405 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CACNA2D4-216ENST00000543405 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
CACNA2D4-216ENST00000543405 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
CACNA2D4-216ENST00000543405 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
CACNA2D4-216ENST00000543405 MT1GP13640 62 aa4.51□□□□□ -1.69
CACNA2D4-216ENST00000543405 A0A1B0GU33 70 aa4.5□□□□□ -1.69
CACNA2D4-216ENST00000543405 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
CACNA2D4-216ENST00000543405 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
CACNA2D4-216ENST00000543405 A8MU10 97 aa4.46□□□□□ -1.7
CACNA2D4-216ENST00000543405 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
CACNA2D4-216ENST00000543405 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
CACNA2D4-216ENST00000543405 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CACNA2D4-216ENST00000543405 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
CACNA2D4-216ENST00000543405 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
CACNA2D4-216ENST00000543405 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
CACNA2D4-216ENST00000543405 MT1LQ93083 61 aa4.37□□□□□ -1.71
CACNA2D4-216ENST00000543405 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
CACNA2D4-216ENST00000543405 A0A0D9SG42 100 aa4.32□□□□□ -1.72
CACNA2D4-216ENST00000543405 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
CACNA2D4-216ENST00000543405 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
CACNA2D4-216ENST00000543405 K7ERS5 55 aa4.25□□□□□ -1.73
CACNA2D4-216ENST00000543405 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
CACNA2D4-216ENST00000543405 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
CACNA2D4-216ENST00000543405 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
CACNA2D4-216ENST00000543405 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
CACNA2D4-216ENST00000543405 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CACNA2D4-216ENST00000543405 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
CACNA2D4-216ENST00000543405 ROMO1P60602 79 aa4.11□□□□□ -1.75
CACNA2D4-216ENST00000543405 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
CACNA2D4-216ENST00000543405 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
CACNA2D4-216ENST00000543405 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
CACNA2D4-216ENST00000543405 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
CACNA2D4-216ENST00000543405 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
CACNA2D4-216ENST00000543405 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
CACNA2D4-216ENST00000543405 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
CACNA2D4-216ENST00000543405 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
CACNA2D4-216ENST00000543405 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
CACNA2D4-216ENST00000543405 TNP1P09430 55 aa3.93□□□□□ -1.78
CACNA2D4-216ENST00000543405 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
CACNA2D4-216ENST00000543405 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CACNA2D4-216ENST00000543405 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
CACNA2D4-216ENST00000543405 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CACNA2D4-216ENST00000543405 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
CACNA2D4-216ENST00000543405 MT1AP04731 61 aa3.7□□□□□ -1.82
CACNA2D4-216ENST00000543405 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
CACNA2D4-216ENST00000543405 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
CACNA2D4-216ENST00000543405 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
CACNA2D4-216ENST00000543405 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
CACNA2D4-216ENST00000543405 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CACNA2D4-216ENST00000543405 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CACNA2D4-216ENST00000543405 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
CACNA2D4-216ENST00000543405 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
CACNA2D4-216ENST00000543405 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
CACNA2D4-216ENST00000543405 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CACNA2D4-216ENST00000543405 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
CACNA2D4-216ENST00000543405 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
CACNA2D4-216ENST00000543405 INE1O15225 51 aa2.76□□□□□ -1.97
CACNA2D4-216ENST00000543405 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CACNA2D4-216ENST00000543405 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
CACNA2D4-216ENST00000543405 PRM1P04553 51 aa2.13□□□□□ -2.07
CACNA2D4-216ENST00000543405 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CACNA2D4-216ENST00000543405 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms