RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 Q1T7F1 81 aa4.94□□□□□ -1.62
RTN3-212ENST00000543123 A0A0D9SG42 100 aa4.91□□□□□ -1.62
RTN3-212ENST00000543123 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
RTN3-212ENST00000543123 MT1EP04732 61 aa4.9□□□□□ -1.63
RTN3-212ENST00000543123 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
RTN3-212ENST00000543123 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
RTN3-212ENST00000543123 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
RTN3-212ENST00000543123 A0A1B0GU33 70 aa4.88□□□□□ -1.63
RTN3-212ENST00000543123 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
RTN3-212ENST00000543123 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
RTN3-212ENST00000543123 UQCR11O14957 56 aa4.83□□□□□ -1.64
RTN3-212ENST00000543123 PSPHP1O15172 72 aa4.81□□□□□ -1.64
RTN3-212ENST00000543123 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
RTN3-212ENST00000543123 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
RTN3-212ENST00000543123 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
RTN3-212ENST00000543123 MT1GP13640 62 aa4.78□□□□□ -1.64
RTN3-212ENST00000543123 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
RTN3-212ENST00000543123 A6NED7 52 aa4.73□□□□□ -1.65
RTN3-212ENST00000543123 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
RTN3-212ENST00000543123 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
RTN3-212ENST00000543123 K7ERS5 55 aa4.67□□□□□ -1.66
RTN3-212ENST00000543123 MT1MQ8N339 61 aa4.67□□□□□ -1.66
RTN3-212ENST00000543123 TNP1P09430 55 aa4.66□□□□□ -1.66
RTN3-212ENST00000543123 MT1LQ93083 61 aa4.65□□□□□ -1.67
RTN3-212ENST00000543123 A8MU10 97 aa4.63□□□□□ -1.67
RTN3-212ENST00000543123 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
RTN3-212ENST00000543123 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
RTN3-212ENST00000543123 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
RTN3-212ENST00000543123 MT4P47944 62 aa4.6□□□□□ -1.67
RTN3-212ENST00000543123 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
RTN3-212ENST00000543123 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
RTN3-212ENST00000543123 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
RTN3-212ENST00000543123 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
RTN3-212ENST00000543123 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
RTN3-212ENST00000543123 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
RTN3-212ENST00000543123 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
RTN3-212ENST00000543123 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
RTN3-212ENST00000543123 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
RTN3-212ENST00000543123 ROMO1P60602 79 aa4.33□□□□□ -1.72
RTN3-212ENST00000543123 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
RTN3-212ENST00000543123 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
RTN3-212ENST00000543123 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
RTN3-212ENST00000543123 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
RTN3-212ENST00000543123 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
RTN3-212ENST00000543123 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
RTN3-212ENST00000543123 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
RTN3-212ENST00000543123 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
RTN3-212ENST00000543123 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
RTN3-212ENST00000543123 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
RTN3-212ENST00000543123 MT1AP04731 61 aa3.97□□□□□ -1.77
RTN3-212ENST00000543123 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
RTN3-212ENST00000543123 MT3P25713 68 aa3.93□□□□□ -1.78
RTN3-212ENST00000543123 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
RTN3-212ENST00000543123 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
RTN3-212ENST00000543123 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
RTN3-212ENST00000543123 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
RTN3-212ENST00000543123 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
RTN3-212ENST00000543123 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
RTN3-212ENST00000543123 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
RTN3-212ENST00000543123 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
RTN3-212ENST00000543123 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
RTN3-212ENST00000543123 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
RTN3-212ENST00000543123 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
RTN3-212ENST00000543123 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
RTN3-212ENST00000543123 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
RTN3-212ENST00000543123 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
RTN3-212ENST00000543123 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
RTN3-212ENST00000543123 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
RTN3-212ENST00000543123 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
RTN3-212ENST00000543123 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
RTN3-212ENST00000543123 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
RTN3-212ENST00000543123 INE1O15225 51 aa2.64□□□□□ -1.99
RTN3-212ENST00000543123 PHGR1C9JFL3 82 aa2.58□□□□□ -2
RTN3-212ENST00000543123 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
RTN3-212ENST00000543123 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RTN3-212ENST00000543123 PRM1P04553 51 aa2.2□□□□□ -2.06
RTN3-212ENST00000543123 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
RTN3-212ENST00000543123 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms