RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ROMO1P60602 79 aa6.2□□□□□ -1.42
RABGGTA-203ENST00000543002 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
RABGGTA-203ENST00000543002 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
RABGGTA-203ENST00000543002 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
RABGGTA-203ENST00000543002 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
RABGGTA-203ENST00000543002 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
RABGGTA-203ENST00000543002 MT1LQ93083 61 aa6.12□□□□□ -1.43
RABGGTA-203ENST00000543002 MT1GP13640 62 aa6.11□□□□□ -1.43
RABGGTA-203ENST00000543002 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
RABGGTA-203ENST00000543002 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
RABGGTA-203ENST00000543002 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
RABGGTA-203ENST00000543002 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
RABGGTA-203ENST00000543002 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
RABGGTA-203ENST00000543002 MT1MQ8N339 61 aa6□□□□□ -1.45
RABGGTA-203ENST00000543002 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
RABGGTA-203ENST00000543002 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
RABGGTA-203ENST00000543002 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
RABGGTA-203ENST00000543002 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
RABGGTA-203ENST00000543002 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
RABGGTA-203ENST00000543002 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
RABGGTA-203ENST00000543002 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
RABGGTA-203ENST00000543002 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
RABGGTA-203ENST00000543002 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
RABGGTA-203ENST00000543002 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
RABGGTA-203ENST00000543002 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
RABGGTA-203ENST00000543002 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
RABGGTA-203ENST00000543002 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
RABGGTA-203ENST00000543002 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
RABGGTA-203ENST00000543002 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
RABGGTA-203ENST00000543002 MT4P47944 62 aa5.43□□□□□ -1.54
RABGGTA-203ENST00000543002 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
RABGGTA-203ENST00000543002 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
RABGGTA-203ENST00000543002 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
RABGGTA-203ENST00000543002 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
RABGGTA-203ENST00000543002 MT1AP04731 61 aa5.22□□□□□ -1.57
RABGGTA-203ENST00000543002 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
RABGGTA-203ENST00000543002 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
RABGGTA-203ENST00000543002 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
RABGGTA-203ENST00000543002 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
RABGGTA-203ENST00000543002 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
RABGGTA-203ENST00000543002 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
RABGGTA-203ENST00000543002 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
RABGGTA-203ENST00000543002 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
RABGGTA-203ENST00000543002 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
RABGGTA-203ENST00000543002 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
RABGGTA-203ENST00000543002 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
RABGGTA-203ENST00000543002 H3BS24 57 aa4.83□□□□□ -1.64
RABGGTA-203ENST00000543002 MT3P25713 68 aa4.75□□□□□ -1.65
RABGGTA-203ENST00000543002 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
RABGGTA-203ENST00000543002 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
RABGGTA-203ENST00000543002 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
RABGGTA-203ENST00000543002 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
RABGGTA-203ENST00000543002 A0A0A0MQY5 61 aa4.46□□□□□ -1.69
RABGGTA-203ENST00000543002 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
RABGGTA-203ENST00000543002 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
RABGGTA-203ENST00000543002 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
RABGGTA-203ENST00000543002 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
RABGGTA-203ENST00000543002 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
RABGGTA-203ENST00000543002 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
RABGGTA-203ENST00000543002 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
RABGGTA-203ENST00000543002 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
RABGGTA-203ENST00000543002 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
RABGGTA-203ENST00000543002 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
RABGGTA-203ENST00000543002 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
RABGGTA-203ENST00000543002 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
RABGGTA-203ENST00000543002 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
RABGGTA-203ENST00000543002 INE1O15225 51 aa3.81□□□□□ -1.8
RABGGTA-203ENST00000543002 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
RABGGTA-203ENST00000543002 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
RABGGTA-203ENST00000543002 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
RABGGTA-203ENST00000543002 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
RABGGTA-203ENST00000543002 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
RABGGTA-203ENST00000543002 PRM1P04553 51 aa3.18□□□□□ -1.9
RABGGTA-203ENST00000543002 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
RABGGTA-203ENST00000543002 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RABGGTA-203ENST00000543002 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
RABGGTA-203ENST00000543002 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
RABGGTA-203ENST00000543002 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 126.5 ms