RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 LCE3BQ5TA77 95 aa2.6□□□□□ -1.99
VEGFB-203ENST00000541681 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
VEGFB-203ENST00000541681 SPRR2EP22531 72 aa2.59□□□□□ -1.99
VEGFB-203ENST00000541681 SPRR2BP35325 72 aa2.59□□□□□ -1.99
VEGFB-203ENST00000541681 SPRR2AP35326 72 aa2.59□□□□□ -1.99
VEGFB-203ENST00000541681 LCE3AQ5TA76 89 aa2.58□□□□□ -2
VEGFB-203ENST00000541681 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
VEGFB-203ENST00000541681 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
VEGFB-203ENST00000541681 KRTAP10-12P60413 245 aa2.56□□□□□ -2
VEGFB-203ENST00000541681 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
VEGFB-203ENST00000541681 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
VEGFB-203ENST00000541681 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
VEGFB-203ENST00000541681 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
VEGFB-203ENST00000541681 SPRR2DP22532 72 aa2.5□□□□□ -2.01
VEGFB-203ENST00000541681 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
VEGFB-203ENST00000541681 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
VEGFB-203ENST00000541681 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
VEGFB-203ENST00000541681 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
VEGFB-203ENST00000541681 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
VEGFB-203ENST00000541681 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
VEGFB-203ENST00000541681 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
VEGFB-203ENST00000541681 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
VEGFB-203ENST00000541681 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
VEGFB-203ENST00000541681 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
VEGFB-203ENST00000541681 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
VEGFB-203ENST00000541681 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
VEGFB-203ENST00000541681 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
VEGFB-203ENST00000541681 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
VEGFB-203ENST00000541681 MT1EP04732 61 aa2.33□□□□□ -2.04
VEGFB-203ENST00000541681 MT1LQ93083 61 aa2.31□□□□□ -2.04
VEGFB-203ENST00000541681 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
VEGFB-203ENST00000541681 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
VEGFB-203ENST00000541681 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
VEGFB-203ENST00000541681 MT3P25713 68 aa2.28□□□□□ -2.04
VEGFB-203ENST00000541681 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
VEGFB-203ENST00000541681 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
VEGFB-203ENST00000541681 MT1GP13640 62 aa2.25□□□□□ -2.05
VEGFB-203ENST00000541681 MT4P47944 62 aa2.21□□□□□ -2.06
VEGFB-203ENST00000541681 MT1MQ8N339 61 aa2.2□□□□□ -2.06
VEGFB-203ENST00000541681 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
VEGFB-203ENST00000541681 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
VEGFB-203ENST00000541681 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
VEGFB-203ENST00000541681 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
VEGFB-203ENST00000541681 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
VEGFB-203ENST00000541681 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
VEGFB-203ENST00000541681 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
VEGFB-203ENST00000541681 INE1O15225 51 aa2.03□□□□□ -2.08
VEGFB-203ENST00000541681 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
VEGFB-203ENST00000541681 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
VEGFB-203ENST00000541681 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
VEGFB-203ENST00000541681 MT1AP04731 61 aa1.97□□□□□ -2.09
VEGFB-203ENST00000541681 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
VEGFB-203ENST00000541681 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
VEGFB-203ENST00000541681 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
VEGFB-203ENST00000541681 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
VEGFB-203ENST00000541681 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
VEGFB-203ENST00000541681 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
VEGFB-203ENST00000541681 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
VEGFB-203ENST00000541681 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
VEGFB-203ENST00000541681 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
VEGFB-203ENST00000541681 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
VEGFB-203ENST00000541681 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
VEGFB-203ENST00000541681 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
VEGFB-203ENST00000541681 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
VEGFB-203ENST00000541681 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
VEGFB-203ENST00000541681 LCE1EQ5T753 118 aa1.72□□□□□ -2.13
VEGFB-203ENST00000541681 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
VEGFB-203ENST00000541681 PRM1P04553 51 aa1.54□□□□□ -2.16
VEGFB-203ENST00000541681 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
VEGFB-203ENST00000541681 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
VEGFB-203ENST00000541681 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
VEGFB-203ENST00000541681 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
VEGFB-203ENST00000541681 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
VEGFB-203ENST00000541681 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
VEGFB-203ENST00000541681 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
VEGFB-203ENST00000541681 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
VEGFB-203ENST00000541681 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
VEGFB-203ENST00000541681 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 42 ms