RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
LMO3-226ENST00000541589 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
LMO3-226ENST00000541589 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
LMO3-226ENST00000541589 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
LMO3-226ENST00000541589 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
LMO3-226ENST00000541589 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
LMO3-226ENST00000541589 KMT2DO14686 5537 aa3.63□□□□□ -1.83
LMO3-226ENST00000541589 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
LMO3-226ENST00000541589 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
LMO3-226ENST00000541589 ROMO1P60602 79 aa3.6□□□□□ -1.83
LMO3-226ENST00000541589 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.84
LMO3-226ENST00000541589 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
LMO3-226ENST00000541589 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
LMO3-226ENST00000541589 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
LMO3-226ENST00000541589 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
LMO3-226ENST00000541589 PLAC4Q8WY50 150 aa3.49□□□□□ -1.85
LMO3-226ENST00000541589 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
LMO3-226ENST00000541589 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
LMO3-226ENST00000541589 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
LMO3-226ENST00000541589 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
LMO3-226ENST00000541589 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
LMO3-226ENST00000541589 MT1BP07438 61 aa3.46□□□□□ -1.86
LMO3-226ENST00000541589 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
LMO3-226ENST00000541589 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
LMO3-226ENST00000541589 SPRR2EP22531 72 aa3.42□□□□□ -1.86
LMO3-226ENST00000541589 SPRR2BP35325 72 aa3.42□□□□□ -1.86
LMO3-226ENST00000541589 SPRR2AP35326 72 aa3.42□□□□□ -1.86
LMO3-226ENST00000541589 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
LMO3-226ENST00000541589 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
LMO3-226ENST00000541589 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
LMO3-226ENST00000541589 TNP1P09430 55 aa3.36□□□□□ -1.87
LMO3-226ENST00000541589 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
LMO3-226ENST00000541589 MT1XP80297 61 aa3.32□□□□□ -1.88
LMO3-226ENST00000541589 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
LMO3-226ENST00000541589 SPRR2DP22532 72 aa3.31□□□□□ -1.88
LMO3-226ENST00000541589 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
LMO3-226ENST00000541589 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
LMO3-226ENST00000541589 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
LMO3-226ENST00000541589 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
LMO3-226ENST00000541589 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
LMO3-226ENST00000541589 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
LMO3-226ENST00000541589 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
LMO3-226ENST00000541589 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
LMO3-226ENST00000541589 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
LMO3-226ENST00000541589 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
LMO3-226ENST00000541589 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
LMO3-226ENST00000541589 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
LMO3-226ENST00000541589 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
LMO3-226ENST00000541589 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.93
LMO3-226ENST00000541589 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.93
LMO3-226ENST00000541589 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
LMO3-226ENST00000541589 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
LMO3-226ENST00000541589 MT4P47944 62 aa2.93□□□□□ -1.94
LMO3-226ENST00000541589 MT1EP04732 61 aa2.91□□□□□ -1.94
LMO3-226ENST00000541589 MT1LQ93083 61 aa2.87□□□□□ -1.95
LMO3-226ENST00000541589 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
LMO3-226ENST00000541589 MT1GP13640 62 aa2.77□□□□□ -1.97
LMO3-226ENST00000541589 MT1MQ8N339 61 aa2.74□□□□□ -1.97
LMO3-226ENST00000541589 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
LMO3-226ENST00000541589 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
LMO3-226ENST00000541589 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
LMO3-226ENST00000541589 MUC5ACP98088 5654 aa2.58□□□□□ -2
LMO3-226ENST00000541589 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
LMO3-226ENST00000541589 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
LMO3-226ENST00000541589 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
LMO3-226ENST00000541589 INE1O15225 51 aa2.47□□□□□ -2.01
LMO3-226ENST00000541589 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
LMO3-226ENST00000541589 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
LMO3-226ENST00000541589 MT1AP04731 61 aa2.45□□□□□ -2.02
LMO3-226ENST00000541589 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.02
LMO3-226ENST00000541589 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
LMO3-226ENST00000541589 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
LMO3-226ENST00000541589 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
LMO3-226ENST00000541589 PRM1P04553 51 aa1.88□□□□□ -2.11
LMO3-226ENST00000541589 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
LMO3-226ENST00000541589 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
LMO3-226ENST00000541589 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
LMO3-226ENST00000541589 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms