RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	KRTAP2-3	P0C7H8	128 aa		6.09	□□□□□ -1.44
CCDC189-204	ENST00000541260	KRTAP2-4	Q9BYR9	128 aa		6.09	□□□□□ -1.44
CCDC189-204	ENST00000541260	BRK1	Q8WUW1	75 aa		6.08	□□□□□ -1.44
CCDC189-204	ENST00000541260	KRTAP12-3	P60328	96 aa		6.07	□□□□□ -1.44
CCDC189-204	ENST00000541260	MT1G	P13640	62 aa		6.04	□□□□□ -1.44
CCDC189-204	ENST00000541260	MT1L	Q93083	61 aa		6.04	□□□□□ -1.44
CCDC189-204	ENST00000541260	PP632	Q6XCG6	107 aa		5.98	□□□□□ -1.45
CCDC189-204	ENST00000541260	LCE3B	Q5TA77	95 aa		5.94	□□□□□ -1.46
CCDC189-204	ENST00000541260	MT1M	Q8N339	61 aa		5.92	□□□□□ -1.46
CCDC189-204	ENST00000541260	KRTAP2-2	Q9BYT5	123 aa		5.92	□□□□□ -1.46
CCDC189-204	ENST00000541260	KRTAP2-1	Q9BYU5	128 aa		5.92	□□□□□ -1.46
CCDC189-204	ENST00000541260	KRTAP19-4	Q3LI73	84 aa		5.83	□□□□□ -1.48
CCDC189-204	ENST00000541260	KRTAP15-1	Q3LI76	137 aa		5.81	□□□□□ -1.48
CCDC189-204	ENST00000541260	DST	Q03001	7570 aa	Known RBP	5.79	□□□□□ -1.48
CCDC189-204	ENST00000541260	PMAIP1	Q13794	54 aa		5.75	□□□□□ -1.49
CCDC189-204	ENST00000541260	KRTAP4-3	Q9BYR4	195 aa		5.74	□□□□□ -1.49
CCDC189-204	ENST00000541260	KRTAP4-7	Q9BYR0	210 aa		5.74	□□□□□ -1.49
CCDC189-204	ENST00000541260	PRO0628	Q9UI54	55 aa		5.66	□□□□□ -1.5
CCDC189-204	ENST00000541260	LCE3C	Q5T5A8	94 aa		5.64	□□□□□ -1.51
CCDC189-204	ENST00000541260	LCE4A	Q5TA78	99 aa		5.48	□□□□□ -1.53
CCDC189-204	ENST00000541260	KRTAP5-4	Q6L8H1	288 aa		5.46	□□□□□ -1.54
CCDC189-204	ENST00000541260	PRAC1	Q96KF2	57 aa		5.43	□□□□□ -1.54
CCDC189-204	ENST00000541260	LOC100996750	A0A140TA64	210 aa		5.42	□□□□□ -1.54
CCDC189-204	ENST00000541260	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.42	□□□□□ -1.54
CCDC189-204	ENST00000541260	KRTAP4-9	Q9BYQ8	210 aa		5.4	□□□□□ -1.54
CCDC189-204	ENST00000541260	LCE1D	Q5T752	114 aa		5.34	□□□□□ -1.55
CCDC189-204	ENST00000541260	MT4	P47944	62 aa		5.32	□□□□□ -1.56
CCDC189-204	ENST00000541260	KTN1-AS1	Q86SY8	53 aa		5.32	□□□□□ -1.56
CCDC189-204	ENST00000541260	KRTAP9-6	A8MVA2	160 aa		5.3	□□□□□ -1.56
CCDC189-204	ENST00000541260	KRTAP4-6	Q9BYQ5	205 aa		5.23	□□□□□ -1.57
CCDC189-204	ENST00000541260	HMCN1	Q96RW7	5635 aa		5.18	□□□□□ -1.58
CCDC189-204	ENST00000541260	KRTAP12-4	P60329	112 aa		5.17	□□□□□ -1.58
CCDC189-204	ENST00000541260	MT1A	P04731	61 aa		5.16	□□□□□ -1.58
CCDC189-204	ENST00000541260	SYNE1	Q8NF91	8797 aa	Known RBP	5.15	□□□□□ -1.59
CCDC189-204	ENST00000541260	SPRR5	A0A1B0GTR4	108 aa		5.14	□□□□□ -1.59
CCDC189-204	ENST00000541260	KRTAP20-2	Q3LI61	65 aa		5.1	□□□□□ -1.59
CCDC189-204	ENST00000541260	KRTAP6-1	Q3LI64	71 aa		5.08	□□□□□ -1.6
CCDC189-204	ENST00000541260		H3BS24	57 aa		5.07	□□□□□ -1.6
CCDC189-204	ENST00000541260	SVIP	Q8NHG7	77 aa		5.01	□□□□□ -1.61
CCDC189-204	ENST00000541260	KRTAP5-3	Q6L8H2	238 aa		4.96	□□□□□ -1.62
CCDC189-204	ENST00000541260	KRTAP9-4	Q9BYQ2	154 aa		4.94	□□□□□ -1.62
CCDC189-204	ENST00000541260	KRTAP5-2	Q701N4	177 aa		4.84	□□□□□ -1.63
CCDC189-204	ENST00000541260	AHNAK2	Q8IVF2	5795 aa		4.83	□□□□□ -1.64
CCDC189-204	ENST00000541260	GPR98	Q8WXG9	6306 aa		4.82	□□□□□ -1.64
CCDC189-204	ENST00000541260	KRTAP5-10	Q6L8G5	202 aa		4.79	□□□□□ -1.64
CCDC189-204	ENST00000541260	KRTAP6-2	Q3LI66	62 aa		4.78	□□□□□ -1.64
CCDC189-204	ENST00000541260	MT3	P25713	68 aa		4.7	□□□□□ -1.66
CCDC189-204	ENST00000541260	KRTAP4-11	Q9BYQ6	195 aa		4.57	□□□□□ -1.68
CCDC189-204	ENST00000541260	KRTAP5-7	Q6L8G8	165 aa		4.56	□□□□□ -1.68
CCDC189-204	ENST00000541260	LUZP6	Q538Z0	58 aa		4.55	□□□□□ -1.68
CCDC189-204	ENST00000541260	OBSCN	Q5VST9	7968 aa		4.41	□□□□□ -1.7
CCDC189-204	ENST00000541260	KRTAP5-8	O75690	187 aa		4.41	□□□□□ -1.7
CCDC189-204	ENST00000541260	KRTAP5-1	Q6L8H4	278 aa		4.27	□□□□□ -1.73
CCDC189-204	ENST00000541260	LCE1E	Q5T753	118 aa		4.25	□□□□□ -1.73
CCDC189-204	ENST00000541260	LCE3D	Q9BYE3	92 aa		4.14	□□□□□ -1.75
CCDC189-204	ENST00000541260	MUC5AC	P98088	5654 aa		4.11	□□□□□ -1.75
CCDC189-204	ENST00000541260	KRTAP9-9	Q9BYP9	154 aa		4.1	□□□□□ -1.75
CCDC189-204	ENST00000541260	NDUFAF8	A1L188	74 aa		3.99	□□□□□ -1.77
CCDC189-204	ENST00000541260	KRTAP4-12	Q9BQ66	201 aa		3.98	□□□□□ -1.77
CCDC189-204	ENST00000541260	LCE3E	Q5T5B0	92 aa		3.96	□□□□□ -1.78
CCDC189-204	ENST00000541260	KRTAP4-2	Q9BYR5	136 aa		3.95	□□□□□ -1.78
CCDC189-204	ENST00000541260	LCE1C	Q5T751	118 aa		3.94	□□□□□ -1.78
CCDC189-204	ENST00000541260	LCE1B	Q5T7P3	118 aa		3.94	□□□□□ -1.78
CCDC189-204	ENST00000541260	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.93	□□□□□ -1.78
CCDC189-204	ENST00000541260		A0A0A0MQY5	61 aa		3.92	□□□□□ -1.78
CCDC189-204	ENST00000541260	AHNAK	Q09666	5890 aa	Known RBP	3.85	□□□□□ -1.79
CCDC189-204	ENST00000541260	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.64	□□□□□ -1.83
CCDC189-204	ENST00000541260	KRTAP5-11	Q6L8G4	156 aa		3.53	□□□□□ -1.84
CCDC189-204	ENST00000541260	KRTAP21-2	Q3LI59	83 aa		3.36	□□□□□ -1.87
CCDC189-204	ENST00000541260	LCE1F	Q5T754	118 aa		3.36	□□□□□ -1.87
CCDC189-204	ENST00000541260	INE1	O15225	51 aa		3.31	□□□□□ -1.88
CCDC189-204	ENST00000541260	PRM1	P04553	51 aa		3.16	□□□□□ -1.9
CCDC189-204	ENST00000541260	PHGR1	C9JFL3	82 aa		3.03	□□□□□ -1.92
CCDC189-204	ENST00000541260	KRTAP4-4	Q9BYR3	166 aa		2.98	□□□□□ -1.93
CCDC189-204	ENST00000541260	MUC19	Q7Z5P9	8384 aa		2.7	□□□□□ -1.98
CCDC189-204	ENST00000541260	KRTAP21-1	Q3LI58	79 aa		2.1	□□□□□ -2.07
CCDC189-204	ENST00000541260	MUC16	Q8WXI7	14507 aa		1.91	□□□□□ -2.1

Retrieved 77 of 20,778 RNA–protein pairs in 91.9 ms