RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
YBX3-209ENST00000540747 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
YBX3-209ENST00000540747 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
YBX3-209ENST00000540747 R4GN34 69 aa2.9□□□□□ -1.95
YBX3-209ENST00000540747 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
YBX3-209ENST00000540747 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
YBX3-209ENST00000540747 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
YBX3-209ENST00000540747 C10orf95Q9H7T3 257 aa2.83□□□□□ -1.96
YBX3-209ENST00000540747 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
YBX3-209ENST00000540747 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
YBX3-209ENST00000540747 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
YBX3-209ENST00000540747 CAMK2N1Q7Z7J9 78 aa2.77□□□□□ -1.97
YBX3-209ENST00000540747 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
YBX3-209ENST00000540747 MT1EP04732 61 aa2.75□□□□□ -1.97
YBX3-209ENST00000540747 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
YBX3-209ENST00000540747 LCE4AQ5TA78 99 aa2.71□□□□□ -1.98
YBX3-209ENST00000540747 KRTAP15-1Q3LI76 137 aa2.7□□□□□ -1.98
YBX3-209ENST00000540747 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
YBX3-209ENST00000540747 H3BS24 57 aa2.69□□□□□ -1.98
YBX3-209ENST00000540747 MT4P47944 62 aa2.68□□□□□ -1.98
YBX3-209ENST00000540747 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
YBX3-209ENST00000540747 TNP1P09430 55 aa2.66□□□□□ -1.98
YBX3-209ENST00000540747 MT1GP13640 62 aa2.66□□□□□ -1.98
YBX3-209ENST00000540747 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
YBX3-209ENST00000540747 MT1MQ8N339 61 aa2.63□□□□□ -1.99
YBX3-209ENST00000540747 KRTAP23-1A1A580 65 aa2.62□□□□□ -1.99
YBX3-209ENST00000540747 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
YBX3-209ENST00000540747 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
YBX3-209ENST00000540747 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
YBX3-209ENST00000540747 MT1LQ93083 61 aa2.59□□□□□ -1.99
YBX3-209ENST00000540747 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
YBX3-209ENST00000540747 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
YBX3-209ENST00000540747 LUZP6Q538Z0 58 aa2.56□□□□□ -2
YBX3-209ENST00000540747 LOC100996750A0A140TA64 210 aa2.54□□□□□ -2
YBX3-209ENST00000540747 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
YBX3-209ENST00000540747 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
YBX3-209ENST00000540747 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
YBX3-209ENST00000540747 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
YBX3-209ENST00000540747 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
YBX3-209ENST00000540747 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
YBX3-209ENST00000540747 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
YBX3-209ENST00000540747 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
YBX3-209ENST00000540747 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
YBX3-209ENST00000540747 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
YBX3-209ENST00000540747 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
YBX3-209ENST00000540747 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
YBX3-209ENST00000540747 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
YBX3-209ENST00000540747 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
YBX3-209ENST00000540747 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
YBX3-209ENST00000540747 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
YBX3-209ENST00000540747 KRTAP19-4Q3LI73 84 aa2.22□□□□□ -2.05
YBX3-209ENST00000540747 MT1AP04731 61 aa2.2□□□□□ -2.06
YBX3-209ENST00000540747 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
YBX3-209ENST00000540747 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
YBX3-209ENST00000540747 INE1O15225 51 aa2.18□□□□□ -2.06
YBX3-209ENST00000540747 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
YBX3-209ENST00000540747 KRTAP9-4Q9BYQ2 154 aa2.14□□□□□ -2.07
YBX3-209ENST00000540747 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
YBX3-209ENST00000540747 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
YBX3-209ENST00000540747 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
YBX3-209ENST00000540747 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
YBX3-209ENST00000540747 MT3P25713 68 aa2□□□□□ -2.09
YBX3-209ENST00000540747 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
YBX3-209ENST00000540747 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
YBX3-209ENST00000540747 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
YBX3-209ENST00000540747 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
YBX3-209ENST00000540747 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
YBX3-209ENST00000540747 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
YBX3-209ENST00000540747 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
YBX3-209ENST00000540747 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
YBX3-209ENST00000540747 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
YBX3-209ENST00000540747 PRM1P04553 51 aa1.58□□□□□ -2.16
YBX3-209ENST00000540747 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
YBX3-209ENST00000540747 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
YBX3-209ENST00000540747 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
YBX3-209ENST00000540747 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
YBX3-209ENST00000540747 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
YBX3-209ENST00000540747 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 137 ms