RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
PPFIBP1-212ENST00000540503 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
PPFIBP1-212ENST00000540503 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
PPFIBP1-212ENST00000540503 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
PPFIBP1-212ENST00000540503 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
PPFIBP1-212ENST00000540503 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
PPFIBP1-212ENST00000540503 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
PPFIBP1-212ENST00000540503 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
PPFIBP1-212ENST00000540503 MT1EP04732 61 aa3.8□□□□□ -1.8
PPFIBP1-212ENST00000540503 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
PPFIBP1-212ENST00000540503 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
PPFIBP1-212ENST00000540503 SPRR2EP22531 72 aa3.78□□□□□ -1.8
PPFIBP1-212ENST00000540503 SPRR2BP35325 72 aa3.78□□□□□ -1.8
PPFIBP1-212ENST00000540503 SPRR2AP35326 72 aa3.78□□□□□ -1.8
PPFIBP1-212ENST00000540503 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
PPFIBP1-212ENST00000540503 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
PPFIBP1-212ENST00000540503 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
PPFIBP1-212ENST00000540503 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
PPFIBP1-212ENST00000540503 NEBP20929 6669 aa3.7□□□□□ -1.82
PPFIBP1-212ENST00000540503 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
PPFIBP1-212ENST00000540503 MT1LQ93083 61 aa3.69□□□□□ -1.82
PPFIBP1-212ENST00000540503 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
PPFIBP1-212ENST00000540503 MT1GP13640 62 aa3.66□□□□□ -1.82
PPFIBP1-212ENST00000540503 SPRR2DP22532 72 aa3.66□□□□□ -1.82
PPFIBP1-212ENST00000540503 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
PPFIBP1-212ENST00000540503 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
PPFIBP1-212ENST00000540503 MT1MQ8N339 61 aa3.6□□□□□ -1.83
PPFIBP1-212ENST00000540503 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
PPFIBP1-212ENST00000540503 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
PPFIBP1-212ENST00000540503 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
PPFIBP1-212ENST00000540503 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
PPFIBP1-212ENST00000540503 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
PPFIBP1-212ENST00000540503 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
PPFIBP1-212ENST00000540503 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
PPFIBP1-212ENST00000540503 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
PPFIBP1-212ENST00000540503 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
PPFIBP1-212ENST00000540503 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
PPFIBP1-212ENST00000540503 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
PPFIBP1-212ENST00000540503 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PPFIBP1-212ENST00000540503 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
PPFIBP1-212ENST00000540503 MT1AP04731 61 aa3.16□□□□□ -1.9
PPFIBP1-212ENST00000540503 MT4P47944 62 aa3.15□□□□□ -1.91
PPFIBP1-212ENST00000540503 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
PPFIBP1-212ENST00000540503 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PPFIBP1-212ENST00000540503 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
PPFIBP1-212ENST00000540503 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
PPFIBP1-212ENST00000540503 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
PPFIBP1-212ENST00000540503 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
PPFIBP1-212ENST00000540503 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
PPFIBP1-212ENST00000540503 MT3P25713 68 aa2.98□□□□□ -1.93
PPFIBP1-212ENST00000540503 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
PPFIBP1-212ENST00000540503 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
PPFIBP1-212ENST00000540503 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
PPFIBP1-212ENST00000540503 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
PPFIBP1-212ENST00000540503 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
PPFIBP1-212ENST00000540503 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
PPFIBP1-212ENST00000540503 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
PPFIBP1-212ENST00000540503 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
PPFIBP1-212ENST00000540503 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
PPFIBP1-212ENST00000540503 KRTAP5-8O75690 187 aa2.57□□□□□ -2
PPFIBP1-212ENST00000540503 LCE1EQ5T753 118 aa2.56□□□□□ -2
PPFIBP1-212ENST00000540503 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
PPFIBP1-212ENST00000540503 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
PPFIBP1-212ENST00000540503 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
PPFIBP1-212ENST00000540503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
PPFIBP1-212ENST00000540503 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
PPFIBP1-212ENST00000540503 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PPFIBP1-212ENST00000540503 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
PPFIBP1-212ENST00000540503 INE1O15225 51 aa2.35□□□□□ -2.03
PPFIBP1-212ENST00000540503 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
PPFIBP1-212ENST00000540503 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
PPFIBP1-212ENST00000540503 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
PPFIBP1-212ENST00000540503 PRM1P04553 51 aa2.07□□□□□ -2.08
PPFIBP1-212ENST00000540503 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
PPFIBP1-212ENST00000540503 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PPFIBP1-212ENST00000540503 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
PPFIBP1-212ENST00000540503 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
PPFIBP1-212ENST00000540503 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms