RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
TRAPPC1-202ENST00000540486 MT1XP80297 61 aa3.66□□□□□ -1.82
TRAPPC1-202ENST00000540486 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
TRAPPC1-202ENST00000540486 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
TRAPPC1-202ENST00000540486 LINC01554Q52M75 96 aa3.65□□□□□ -1.83
TRAPPC1-202ENST00000540486 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
TRAPPC1-202ENST00000540486 Q1T7F1 81 aa3.63□□□□□ -1.83
TRAPPC1-202ENST00000540486 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
TRAPPC1-202ENST00000540486 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC1-202ENST00000540486 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
TRAPPC1-202ENST00000540486 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
TRAPPC1-202ENST00000540486 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
TRAPPC1-202ENST00000540486 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
TRAPPC1-202ENST00000540486 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
TRAPPC1-202ENST00000540486 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
TRAPPC1-202ENST00000540486 A0A1B0GU33 70 aa3.52□□□□□ -1.85
TRAPPC1-202ENST00000540486 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
TRAPPC1-202ENST00000540486 MT4P47944 62 aa3.51□□□□□ -1.85
TRAPPC1-202ENST00000540486 PSPHP1O15172 72 aa3.5□□□□□ -1.85
TRAPPC1-202ENST00000540486 A0A1B0GU69 56 aa3.49□□□□□ -1.85
TRAPPC1-202ENST00000540486 A0A0D9SG42 100 aa3.48□□□□□ -1.85
TRAPPC1-202ENST00000540486 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
TRAPPC1-202ENST00000540486 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
TRAPPC1-202ENST00000540486 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
TRAPPC1-202ENST00000540486 A6NED7 52 aa3.44□□□□□ -1.86
TRAPPC1-202ENST00000540486 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
TRAPPC1-202ENST00000540486 SPINT4Q6UDR6 99 aa3.43□□□□□ -1.86
TRAPPC1-202ENST00000540486 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
TRAPPC1-202ENST00000540486 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
TRAPPC1-202ENST00000540486 A8MU10 97 aa3.42□□□□□ -1.86
TRAPPC1-202ENST00000540486 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
TRAPPC1-202ENST00000540486 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
TRAPPC1-202ENST00000540486 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
TRAPPC1-202ENST00000540486 UQCR11O14957 56 aa3.31□□□□□ -1.88
TRAPPC1-202ENST00000540486 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
TRAPPC1-202ENST00000540486 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
TRAPPC1-202ENST00000540486 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
TRAPPC1-202ENST00000540486 MT1EP04732 61 aa3.23□□□□□ -1.89
TRAPPC1-202ENST00000540486 MT1GP13640 62 aa3.22□□□□□ -1.89
TRAPPC1-202ENST00000540486 TNP1P09430 55 aa3.21□□□□□ -1.9
TRAPPC1-202ENST00000540486 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
TRAPPC1-202ENST00000540486 ROMO1P60602 79 aa3.2□□□□□ -1.9
TRAPPC1-202ENST00000540486 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
TRAPPC1-202ENST00000540486 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
TRAPPC1-202ENST00000540486 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
TRAPPC1-202ENST00000540486 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
TRAPPC1-202ENST00000540486 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
TRAPPC1-202ENST00000540486 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
TRAPPC1-202ENST00000540486 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
TRAPPC1-202ENST00000540486 K7ERS5 55 aa3.11□□□□□ -1.91
TRAPPC1-202ENST00000540486 MT1MQ8N339 61 aa3.11□□□□□ -1.91
TRAPPC1-202ENST00000540486 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
TRAPPC1-202ENST00000540486 MT1LQ93083 61 aa3.1□□□□□ -1.91
TRAPPC1-202ENST00000540486 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC1-202ENST00000540486 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
TRAPPC1-202ENST00000540486 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
TRAPPC1-202ENST00000540486 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
TRAPPC1-202ENST00000540486 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
TRAPPC1-202ENST00000540486 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TRAPPC1-202ENST00000540486 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TRAPPC1-202ENST00000540486 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
TRAPPC1-202ENST00000540486 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC1-202ENST00000540486 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TRAPPC1-202ENST00000540486 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
TRAPPC1-202ENST00000540486 MT1AP04731 61 aa2.64□□□□□ -1.99
TRAPPC1-202ENST00000540486 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
TRAPPC1-202ENST00000540486 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
TRAPPC1-202ENST00000540486 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
TRAPPC1-202ENST00000540486 INE1O15225 51 aa2.54□□□□□ -2
TRAPPC1-202ENST00000540486 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
TRAPPC1-202ENST00000540486 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TRAPPC1-202ENST00000540486 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
TRAPPC1-202ENST00000540486 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
TRAPPC1-202ENST00000540486 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
TRAPPC1-202ENST00000540486 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TRAPPC1-202ENST00000540486 PRM1P04553 51 aa1.53□□□□□ -2.16
TRAPPC1-202ENST00000540486 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 88.3 ms