RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 PSPHP1O15172 72 aa3.46□□□□□ -1.86
LMO3-222ENST00000540445 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
LMO3-222ENST00000540445 A0A1B0GU33 70 aa3.44□□□□□ -1.86
LMO3-222ENST00000540445 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
LMO3-222ENST00000540445 PRR15LQ9BU68 103 aa3.43□□□□□ -1.86
LMO3-222ENST00000540445 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
LMO3-222ENST00000540445 A6NED7 52 aa3.39□□□□□ -1.87
LMO3-222ENST00000540445 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
LMO3-222ENST00000540445 A0A1B0GU69 56 aa3.37□□□□□ -1.87
LMO3-222ENST00000540445 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
LMO3-222ENST00000540445 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
LMO3-222ENST00000540445 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
LMO3-222ENST00000540445 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
LMO3-222ENST00000540445 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
LMO3-222ENST00000540445 MT1EP04732 61 aa3.34□□□□□ -1.87
LMO3-222ENST00000540445 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
LMO3-222ENST00000540445 A8MU10 97 aa3.3□□□□□ -1.88
LMO3-222ENST00000540445 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
LMO3-222ENST00000540445 MT1GP13640 62 aa3.27□□□□□ -1.89
LMO3-222ENST00000540445 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
LMO3-222ENST00000540445 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
LMO3-222ENST00000540445 UQCR11O14957 56 aa3.26□□□□□ -1.89
LMO3-222ENST00000540445 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
LMO3-222ENST00000540445 TNP1P09430 55 aa3.25□□□□□ -1.89
LMO3-222ENST00000540445 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
LMO3-222ENST00000540445 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
LMO3-222ENST00000540445 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
LMO3-222ENST00000540445 MT1MQ8N339 61 aa3.19□□□□□ -1.9
LMO3-222ENST00000540445 MT1LQ93083 61 aa3.19□□□□□ -1.9
LMO3-222ENST00000540445 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
LMO3-222ENST00000540445 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
LMO3-222ENST00000540445 MT4P47944 62 aa3.14□□□□□ -1.91
LMO3-222ENST00000540445 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
LMO3-222ENST00000540445 K7ERS5 55 aa3.11□□□□□ -1.91
LMO3-222ENST00000540445 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
LMO3-222ENST00000540445 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
LMO3-222ENST00000540445 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
LMO3-222ENST00000540445 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
LMO3-222ENST00000540445 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
LMO3-222ENST00000540445 ROMO1P60602 79 aa2.96□□□□□ -1.94
LMO3-222ENST00000540445 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
LMO3-222ENST00000540445 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
LMO3-222ENST00000540445 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
LMO3-222ENST00000540445 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
LMO3-222ENST00000540445 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
LMO3-222ENST00000540445 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
LMO3-222ENST00000540445 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
LMO3-222ENST00000540445 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
LMO3-222ENST00000540445 MT1AP04731 61 aa2.71□□□□□ -1.98
LMO3-222ENST00000540445 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
LMO3-222ENST00000540445 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
LMO3-222ENST00000540445 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
LMO3-222ENST00000540445 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
LMO3-222ENST00000540445 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
LMO3-222ENST00000540445 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
LMO3-222ENST00000540445 MT3P25713 68 aa2.59□□□□□ -1.99
LMO3-222ENST00000540445 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
LMO3-222ENST00000540445 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
LMO3-222ENST00000540445 LCE1EQ5T753 118 aa2.55□□□□□ -2
LMO3-222ENST00000540445 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
LMO3-222ENST00000540445 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
LMO3-222ENST00000540445 LUZP6Q538Z0 58 aa2.54□□□□□ -2
LMO3-222ENST00000540445 MUC5ACP98088 5654 aa2.53□□□□□ -2
LMO3-222ENST00000540445 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
LMO3-222ENST00000540445 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
LMO3-222ENST00000540445 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
LMO3-222ENST00000540445 INE1O15225 51 aa2.19□□□□□ -2.06
LMO3-222ENST00000540445 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
LMO3-222ENST00000540445 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
LMO3-222ENST00000540445 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
LMO3-222ENST00000540445 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
LMO3-222ENST00000540445 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
LMO3-222ENST00000540445 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
LMO3-222ENST00000540445 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LMO3-222ENST00000540445 PRM1P04553 51 aa1.54□□□□□ -2.16
LMO3-222ENST00000540445 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
LMO3-222ENST00000540445 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 48.1 ms