RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 MT1LQ93083 61 aa4.26□□□□□ -1.73
CBX3P4-202ENST00000540428 SEC61GP60059 68 aa4.25□□□□□ -1.73
CBX3P4-202ENST00000540428 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
CBX3P4-202ENST00000540428 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
CBX3P4-202ENST00000540428 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
CBX3P4-202ENST00000540428 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
CBX3P4-202ENST00000540428 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
CBX3P4-202ENST00000540428 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CBX3P4-202ENST00000540428 A0A1B0GU33 70 aa4.19□□□□□ -1.74
CBX3P4-202ENST00000540428 A6NED7 52 aa4.17□□□□□ -1.74
CBX3P4-202ENST00000540428 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
CBX3P4-202ENST00000540428 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
CBX3P4-202ENST00000540428 CDC42SE1Q9NRR8 79 aa4.15□□□□□ -1.75
CBX3P4-202ENST00000540428 A8MU10 97 aa4.14□□□□□ -1.75
CBX3P4-202ENST00000540428 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
CBX3P4-202ENST00000540428 A0A1B0GU69 56 aa4.12□□□□□ -1.75
CBX3P4-202ENST00000540428 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CBX3P4-202ENST00000540428 TNP1P09430 55 aa4.1□□□□□ -1.75
CBX3P4-202ENST00000540428 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
CBX3P4-202ENST00000540428 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CBX3P4-202ENST00000540428 UQCR11O14957 56 aa4.04□□□□□ -1.76
CBX3P4-202ENST00000540428 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
CBX3P4-202ENST00000540428 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
CBX3P4-202ENST00000540428 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CBX3P4-202ENST00000540428 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CBX3P4-202ENST00000540428 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CBX3P4-202ENST00000540428 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
CBX3P4-202ENST00000540428 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
CBX3P4-202ENST00000540428 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CBX3P4-202ENST00000540428 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
CBX3P4-202ENST00000540428 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
CBX3P4-202ENST00000540428 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
CBX3P4-202ENST00000540428 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CBX3P4-202ENST00000540428 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
CBX3P4-202ENST00000540428 K7ERS5 55 aa3.78□□□□□ -1.8
CBX3P4-202ENST00000540428 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
CBX3P4-202ENST00000540428 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
CBX3P4-202ENST00000540428 ROMO1P60602 79 aa3.68□□□□□ -1.82
CBX3P4-202ENST00000540428 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CBX3P4-202ENST00000540428 H3BS24 57 aa3.67□□□□□ -1.82
CBX3P4-202ENST00000540428 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
CBX3P4-202ENST00000540428 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
CBX3P4-202ENST00000540428 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
CBX3P4-202ENST00000540428 MT1AP04731 61 aa3.63□□□□□ -1.83
CBX3P4-202ENST00000540428 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CBX3P4-202ENST00000540428 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
CBX3P4-202ENST00000540428 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CBX3P4-202ENST00000540428 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
CBX3P4-202ENST00000540428 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
CBX3P4-202ENST00000540428 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
CBX3P4-202ENST00000540428 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
CBX3P4-202ENST00000540428 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
CBX3P4-202ENST00000540428 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CBX3P4-202ENST00000540428 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
CBX3P4-202ENST00000540428 MT3P25713 68 aa3.33□□□□□ -1.88
CBX3P4-202ENST00000540428 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
CBX3P4-202ENST00000540428 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
CBX3P4-202ENST00000540428 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
CBX3P4-202ENST00000540428 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CBX3P4-202ENST00000540428 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CBX3P4-202ENST00000540428 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
CBX3P4-202ENST00000540428 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
CBX3P4-202ENST00000540428 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CBX3P4-202ENST00000540428 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
CBX3P4-202ENST00000540428 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
CBX3P4-202ENST00000540428 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
CBX3P4-202ENST00000540428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
CBX3P4-202ENST00000540428 INE1O15225 51 aa2.59□□□□□ -1.99
CBX3P4-202ENST00000540428 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
CBX3P4-202ENST00000540428 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CBX3P4-202ENST00000540428 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
CBX3P4-202ENST00000540428 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
CBX3P4-202ENST00000540428 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
CBX3P4-202ENST00000540428 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CBX3P4-202ENST00000540428 PRM1P04553 51 aa1.94□□□□□ -2.1
CBX3P4-202ENST00000540428 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CBX3P4-202ENST00000540428 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 54.5 ms