RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
PRKAB1-205ENST00000540121 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
PRKAB1-205ENST00000540121 MT1XP80297 61 aa5.43□□□□□ -1.54
PRKAB1-205ENST00000540121 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
PRKAB1-205ENST00000540121 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
PRKAB1-205ENST00000540121 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
PRKAB1-205ENST00000540121 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
PRKAB1-205ENST00000540121 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
PRKAB1-205ENST00000540121 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
PRKAB1-205ENST00000540121 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
PRKAB1-205ENST00000540121 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
PRKAB1-205ENST00000540121 NEBP20929 6669 aa5.15□□□□□ -1.59
PRKAB1-205ENST00000540121 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
PRKAB1-205ENST00000540121 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
PRKAB1-205ENST00000540121 INE1O15225 51 aa5□□□□□ -1.61
PRKAB1-205ENST00000540121 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
PRKAB1-205ENST00000540121 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
PRKAB1-205ENST00000540121 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
PRKAB1-205ENST00000540121 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
PRKAB1-205ENST00000540121 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.62
PRKAB1-205ENST00000540121 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.62
PRKAB1-205ENST00000540121 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
PRKAB1-205ENST00000540121 KMT2DO14686 5537 aa4.78□□□□□ -1.64
PRKAB1-205ENST00000540121 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
PRKAB1-205ENST00000540121 MT1EP04732 61 aa4.73□□□□□ -1.65
PRKAB1-205ENST00000540121 MT1LQ93083 61 aa4.72□□□□□ -1.65
PRKAB1-205ENST00000540121 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
PRKAB1-205ENST00000540121 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
PRKAB1-205ENST00000540121 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
PRKAB1-205ENST00000540121 SPRR2EP22531 72 aa4.66□□□□□ -1.66
PRKAB1-205ENST00000540121 SPRR2BP35325 72 aa4.66□□□□□ -1.66
PRKAB1-205ENST00000540121 SPRR2AP35326 72 aa4.66□□□□□ -1.66
PRKAB1-205ENST00000540121 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
PRKAB1-205ENST00000540121 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
PRKAB1-205ENST00000540121 MT1GP13640 62 aa4.53□□□□□ -1.68
PRKAB1-205ENST00000540121 SPRR2DP22532 72 aa4.51□□□□□ -1.69
PRKAB1-205ENST00000540121 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
PRKAB1-205ENST00000540121 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
PRKAB1-205ENST00000540121 MT1MQ8N339 61 aa4.41□□□□□ -1.7
PRKAB1-205ENST00000540121 MT3P25713 68 aa4.4□□□□□ -1.71
PRKAB1-205ENST00000540121 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
PRKAB1-205ENST00000540121 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
PRKAB1-205ENST00000540121 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
PRKAB1-205ENST00000540121 MT1AP04731 61 aa4.1□□□□□ -1.75
PRKAB1-205ENST00000540121 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
PRKAB1-205ENST00000540121 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
PRKAB1-205ENST00000540121 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
PRKAB1-205ENST00000540121 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
PRKAB1-205ENST00000540121 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
PRKAB1-205ENST00000540121 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
PRKAB1-205ENST00000540121 MT4P47944 62 aa3.95□□□□□ -1.78
PRKAB1-205ENST00000540121 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
PRKAB1-205ENST00000540121 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
PRKAB1-205ENST00000540121 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
PRKAB1-205ENST00000540121 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
PRKAB1-205ENST00000540121 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
PRKAB1-205ENST00000540121 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
PRKAB1-205ENST00000540121 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
PRKAB1-205ENST00000540121 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
PRKAB1-205ENST00000540121 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
PRKAB1-205ENST00000540121 PRM1P04553 51 aa3.49□□□□□ -1.85
PRKAB1-205ENST00000540121 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
PRKAB1-205ENST00000540121 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
PRKAB1-205ENST00000540121 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
PRKAB1-205ENST00000540121 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
PRKAB1-205ENST00000540121 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
PRKAB1-205ENST00000540121 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
PRKAB1-205ENST00000540121 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
PRKAB1-205ENST00000540121 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
PRKAB1-205ENST00000540121 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
PRKAB1-205ENST00000540121 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
PRKAB1-205ENST00000540121 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PRKAB1-205ENST00000540121 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
PRKAB1-205ENST00000540121 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
PRKAB1-205ENST00000540121 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
PRKAB1-205ENST00000540121 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
PRKAB1-205ENST00000540121 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 93.1 ms