RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
PABPC1P4-201ENST00000539977 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
PABPC1P4-201ENST00000539977 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
PABPC1P4-201ENST00000539977 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.78
PABPC1P4-201ENST00000539977 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
PABPC1P4-201ENST00000539977 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
PABPC1P4-201ENST00000539977 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
PABPC1P4-201ENST00000539977 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
PABPC1P4-201ENST00000539977 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.8
PABPC1P4-201ENST00000539977 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
PABPC1P4-201ENST00000539977 MT1EP04732 61 aa3.76□□□□□ -1.81
PABPC1P4-201ENST00000539977 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
PABPC1P4-201ENST00000539977 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
PABPC1P4-201ENST00000539977 MT1LQ93083 61 aa3.69□□□□□ -1.82
PABPC1P4-201ENST00000539977 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
PABPC1P4-201ENST00000539977 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
PABPC1P4-201ENST00000539977 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
PABPC1P4-201ENST00000539977 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
PABPC1P4-201ENST00000539977 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
PABPC1P4-201ENST00000539977 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
PABPC1P4-201ENST00000539977 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
PABPC1P4-201ENST00000539977 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
PABPC1P4-201ENST00000539977 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
PABPC1P4-201ENST00000539977 SPRR2EP22531 72 aa3.56□□□□□ -1.84
PABPC1P4-201ENST00000539977 SPRR2BP35325 72 aa3.56□□□□□ -1.84
PABPC1P4-201ENST00000539977 SPRR2AP35326 72 aa3.56□□□□□ -1.84
PABPC1P4-201ENST00000539977 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
PABPC1P4-201ENST00000539977 MT1GP13640 62 aa3.56□□□□□ -1.84
PABPC1P4-201ENST00000539977 MT1MQ8N339 61 aa3.55□□□□□ -1.84
PABPC1P4-201ENST00000539977 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
PABPC1P4-201ENST00000539977 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
PABPC1P4-201ENST00000539977 NEBP20929 6669 aa3.47□□□□□ -1.85
PABPC1P4-201ENST00000539977 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
PABPC1P4-201ENST00000539977 SPRR2DP22532 72 aa3.43□□□□□ -1.86
PABPC1P4-201ENST00000539977 INE1O15225 51 aa3.41□□□□□ -1.86
PABPC1P4-201ENST00000539977 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
PABPC1P4-201ENST00000539977 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
PABPC1P4-201ENST00000539977 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
PABPC1P4-201ENST00000539977 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
PABPC1P4-201ENST00000539977 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
PABPC1P4-201ENST00000539977 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
PABPC1P4-201ENST00000539977 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
PABPC1P4-201ENST00000539977 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
PABPC1P4-201ENST00000539977 MT1AP04731 61 aa3.1□□□□□ -1.91
PABPC1P4-201ENST00000539977 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
PABPC1P4-201ENST00000539977 MT4P47944 62 aa3.03□□□□□ -1.93
PABPC1P4-201ENST00000539977 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
PABPC1P4-201ENST00000539977 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
PABPC1P4-201ENST00000539977 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
PABPC1P4-201ENST00000539977 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
PABPC1P4-201ENST00000539977 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
PABPC1P4-201ENST00000539977 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
PABPC1P4-201ENST00000539977 MT3P25713 68 aa2.82□□□□□ -1.96
PABPC1P4-201ENST00000539977 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
PABPC1P4-201ENST00000539977 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
PABPC1P4-201ENST00000539977 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
PABPC1P4-201ENST00000539977 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
PABPC1P4-201ENST00000539977 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
PABPC1P4-201ENST00000539977 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
PABPC1P4-201ENST00000539977 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
PABPC1P4-201ENST00000539977 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
PABPC1P4-201ENST00000539977 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
PABPC1P4-201ENST00000539977 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
PABPC1P4-201ENST00000539977 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
PABPC1P4-201ENST00000539977 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
PABPC1P4-201ENST00000539977 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
PABPC1P4-201ENST00000539977 PRM1P04553 51 aa2.28□□□□□ -2.04
PABPC1P4-201ENST00000539977 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
PABPC1P4-201ENST00000539977 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PABPC1P4-201ENST00000539977 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
PABPC1P4-201ENST00000539977 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
PABPC1P4-201ENST00000539977 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
PABPC1P4-201ENST00000539977 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PABPC1P4-201ENST00000539977 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
PABPC1P4-201ENST00000539977 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
PABPC1P4-201ENST00000539977 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PABPC1P4-201ENST00000539977 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms