RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
GNE-205ENST00000539815 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
GNE-205ENST00000539815 MT1BP07438 61 aa3.21□□□□□ -1.9
GNE-205ENST00000539815 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
GNE-205ENST00000539815 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
GNE-205ENST00000539815 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
GNE-205ENST00000539815 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
GNE-205ENST00000539815 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
GNE-205ENST00000539815 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
GNE-205ENST00000539815 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
GNE-205ENST00000539815 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
GNE-205ENST00000539815 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
GNE-205ENST00000539815 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
GNE-205ENST00000539815 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
GNE-205ENST00000539815 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
GNE-205ENST00000539815 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
GNE-205ENST00000539815 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
GNE-205ENST00000539815 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
GNE-205ENST00000539815 MT1XP80297 61 aa2.98□□□□□ -1.93
GNE-205ENST00000539815 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
GNE-205ENST00000539815 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
GNE-205ENST00000539815 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
GNE-205ENST00000539815 TNP1P09430 55 aa2.95□□□□□ -1.94
GNE-205ENST00000539815 MT4P47944 62 aa2.95□□□□□ -1.94
GNE-205ENST00000539815 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
GNE-205ENST00000539815 MT1GP13640 62 aa2.82□□□□□ -1.96
GNE-205ENST00000539815 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
GNE-205ENST00000539815 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
GNE-205ENST00000539815 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
GNE-205ENST00000539815 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
GNE-205ENST00000539815 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
GNE-205ENST00000539815 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
GNE-205ENST00000539815 MT1EP04732 61 aa2.71□□□□□ -1.98
GNE-205ENST00000539815 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
GNE-205ENST00000539815 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
GNE-205ENST00000539815 MT1MQ8N339 61 aa2.63□□□□□ -1.99
GNE-205ENST00000539815 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
GNE-205ENST00000539815 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
GNE-205ENST00000539815 MT3P25713 68 aa2.58□□□□□ -2
GNE-205ENST00000539815 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
GNE-205ENST00000539815 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
GNE-205ENST00000539815 MT1LQ93083 61 aa2.57□□□□□ -2
GNE-205ENST00000539815 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
GNE-205ENST00000539815 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
GNE-205ENST00000539815 LCE1EQ5T753 118 aa2.54□□□□□ -2
GNE-205ENST00000539815 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
GNE-205ENST00000539815 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
GNE-205ENST00000539815 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
GNE-205ENST00000539815 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
GNE-205ENST00000539815 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
GNE-205ENST00000539815 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
GNE-205ENST00000539815 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
GNE-205ENST00000539815 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
GNE-205ENST00000539815 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
GNE-205ENST00000539815 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
GNE-205ENST00000539815 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
GNE-205ENST00000539815 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
GNE-205ENST00000539815 MT1AP04731 61 aa2.26□□□□□ -2.05
GNE-205ENST00000539815 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
GNE-205ENST00000539815 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
GNE-205ENST00000539815 PRM1P04553 51 aa2.2□□□□□ -2.06
GNE-205ENST00000539815 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
GNE-205ENST00000539815 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
GNE-205ENST00000539815 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
GNE-205ENST00000539815 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
GNE-205ENST00000539815 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
GNE-205ENST00000539815 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
GNE-205ENST00000539815 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
GNE-205ENST00000539815 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
GNE-205ENST00000539815 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
GNE-205ENST00000539815 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
GNE-205ENST00000539815 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
GNE-205ENST00000539815 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
GNE-205ENST00000539815 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
GNE-205ENST00000539815 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
GNE-205ENST00000539815 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
GNE-205ENST00000539815 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 99.2 ms