RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
USB1-203ENST00000539737 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
USB1-203ENST00000539737 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
USB1-203ENST00000539737 TNP1P09430 55 aa5.54□□□□□ -1.52
USB1-203ENST00000539737 K7ERS5 55 aa5.53□□□□□ -1.52
USB1-203ENST00000539737 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
USB1-203ENST00000539737 A6NED7 52 aa5.48□□□□□ -1.53
USB1-203ENST00000539737 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
USB1-203ENST00000539737 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
USB1-203ENST00000539737 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
USB1-203ENST00000539737 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
USB1-203ENST00000539737 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
USB1-203ENST00000539737 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
USB1-203ENST00000539737 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
USB1-203ENST00000539737 MT1GP13640 62 aa5.36□□□□□ -1.55
USB1-203ENST00000539737 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
USB1-203ENST00000539737 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
USB1-203ENST00000539737 MT1MQ8N339 61 aa5.34□□□□□ -1.55
USB1-203ENST00000539737 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
USB1-203ENST00000539737 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
USB1-203ENST00000539737 MT1LQ93083 61 aa5.25□□□□□ -1.57
USB1-203ENST00000539737 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
USB1-203ENST00000539737 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
USB1-203ENST00000539737 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
USB1-203ENST00000539737 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
USB1-203ENST00000539737 ROMO1P60602 79 aa5.16□□□□□ -1.58
USB1-203ENST00000539737 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
USB1-203ENST00000539737 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
USB1-203ENST00000539737 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
USB1-203ENST00000539737 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
USB1-203ENST00000539737 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
USB1-203ENST00000539737 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
USB1-203ENST00000539737 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
USB1-203ENST00000539737 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
USB1-203ENST00000539737 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
USB1-203ENST00000539737 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
USB1-203ENST00000539737 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
USB1-203ENST00000539737 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
USB1-203ENST00000539737 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
USB1-203ENST00000539737 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
USB1-203ENST00000539737 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
USB1-203ENST00000539737 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
USB1-203ENST00000539737 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
USB1-203ENST00000539737 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
USB1-203ENST00000539737 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
USB1-203ENST00000539737 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
USB1-203ENST00000539737 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
USB1-203ENST00000539737 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
USB1-203ENST00000539737 MT1AP04731 61 aa4.47□□□□□ -1.69
USB1-203ENST00000539737 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
USB1-203ENST00000539737 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
USB1-203ENST00000539737 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
USB1-203ENST00000539737 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
USB1-203ENST00000539737 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
USB1-203ENST00000539737 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
USB1-203ENST00000539737 MT3P25713 68 aa4.14□□□□□ -1.75
USB1-203ENST00000539737 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
USB1-203ENST00000539737 H3BS24 57 aa3.82□□□□□ -1.8
USB1-203ENST00000539737 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
USB1-203ENST00000539737 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
USB1-203ENST00000539737 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
USB1-203ENST00000539737 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
USB1-203ENST00000539737 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
USB1-203ENST00000539737 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
USB1-203ENST00000539737 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
USB1-203ENST00000539737 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
USB1-203ENST00000539737 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
USB1-203ENST00000539737 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
USB1-203ENST00000539737 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
USB1-203ENST00000539737 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
USB1-203ENST00000539737 INE1O15225 51 aa3.09□□□□□ -1.91
USB1-203ENST00000539737 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
USB1-203ENST00000539737 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
USB1-203ENST00000539737 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
USB1-203ENST00000539737 PRM1P04553 51 aa2.64□□□□□ -1.99
USB1-203ENST00000539737 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
USB1-203ENST00000539737 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms