RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 MT1MQ8N339 61 aa2.91□□□□□ -1.94
CD4-209ENST00000539492 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
CD4-209ENST00000539492 SNURFQ9Y675 71 aa2.9□□□□□ -1.95
CD4-209ENST00000539492 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
CD4-209ENST00000539492 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
CD4-209ENST00000539492 MT1LQ93083 61 aa2.88□□□□□ -1.95
CD4-209ENST00000539492 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
CD4-209ENST00000539492 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
CD4-209ENST00000539492 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
CD4-209ENST00000539492 H7BZZ5 65 aa2.82□□□□□ -1.96
CD4-209ENST00000539492 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
CD4-209ENST00000539492 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
CD4-209ENST00000539492 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
CD4-209ENST00000539492 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CD4-209ENST00000539492 Q1T7F1 81 aa2.8□□□□□ -1.96
CD4-209ENST00000539492 COA5Q86WW8 74 aa2.8□□□□□ -1.96
CD4-209ENST00000539492 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
CD4-209ENST00000539492 C10orf95Q9H7T3 257 aa2.79□□□□□ -1.96
CD4-209ENST00000539492 A0A1B0GU33 70 aa2.77□□□□□ -1.97
CD4-209ENST00000539492 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CD4-209ENST00000539492 K7ERS5 55 aa2.73□□□□□ -1.97
CD4-209ENST00000539492 TNP1P09430 55 aa2.73□□□□□ -1.97
CD4-209ENST00000539492 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
CD4-209ENST00000539492 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
CD4-209ENST00000539492 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
CD4-209ENST00000539492 A0A1B0GU69 56 aa2.69□□□□□ -1.98
CD4-209ENST00000539492 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
CD4-209ENST00000539492 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
CD4-209ENST00000539492 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
CD4-209ENST00000539492 A6NED7 52 aa2.67□□□□□ -1.98
CD4-209ENST00000539492 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
CD4-209ENST00000539492 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
CD4-209ENST00000539492 A8MU10 97 aa2.66□□□□□ -1.98
CD4-209ENST00000539492 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
CD4-209ENST00000539492 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
CD4-209ENST00000539492 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
CD4-209ENST00000539492 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
CD4-209ENST00000539492 NDUFAF8A1L188 74 aa2.54□□□□□ -2
CD4-209ENST00000539492 UQCR11O14957 56 aa2.54□□□□□ -2
CD4-209ENST00000539492 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CD4-209ENST00000539492 ROMO1P60602 79 aa2.52□□□□□ -2.01
CD4-209ENST00000539492 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
CD4-209ENST00000539492 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
CD4-209ENST00000539492 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
CD4-209ENST00000539492 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CD4-209ENST00000539492 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
CD4-209ENST00000539492 MIR22HGQ0VDD5 57 aa2.47□□□□□ -2.01
CD4-209ENST00000539492 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
CD4-209ENST00000539492 MT1AP04731 61 aa2.45□□□□□ -2.02
CD4-209ENST00000539492 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CD4-209ENST00000539492 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
CD4-209ENST00000539492 KRTAP15-1Q3LI76 137 aa2.43□□□□□ -2.02
CD4-209ENST00000539492 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
CD4-209ENST00000539492 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
CD4-209ENST00000539492 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
CD4-209ENST00000539492 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CD4-209ENST00000539492 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
CD4-209ENST00000539492 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
CD4-209ENST00000539492 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
CD4-209ENST00000539492 MT3P25713 68 aa2.25□□□□□ -2.05
CD4-209ENST00000539492 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
CD4-209ENST00000539492 INE1O15225 51 aa2.06□□□□□ -2.08
CD4-209ENST00000539492 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
CD4-209ENST00000539492 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
CD4-209ENST00000539492 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
CD4-209ENST00000539492 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
CD4-209ENST00000539492 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
CD4-209ENST00000539492 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
CD4-209ENST00000539492 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
CD4-209ENST00000539492 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
CD4-209ENST00000539492 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CD4-209ENST00000539492 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
CD4-209ENST00000539492 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
CD4-209ENST00000539492 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
CD4-209ENST00000539492 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CD4-209ENST00000539492 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
CD4-209ENST00000539492 PRM1P04553 51 aa1.13□□□□□ -2.23
CD4-209ENST00000539492 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms