RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 ATP5EP2Q5VTU8 51 aa3.05□□□□□ -1.92
NPIPB4-210ENST00000539191 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
NPIPB4-210ENST00000539191 A6NED7 52 aa3.03□□□□□ -1.92
NPIPB4-210ENST00000539191 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
NPIPB4-210ENST00000539191 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
NPIPB4-210ENST00000539191 H7BZZ5 65 aa3.02□□□□□ -1.93
NPIPB4-210ENST00000539191 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
NPIPB4-210ENST00000539191 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
NPIPB4-210ENST00000539191 CAMK2N1Q7Z7J9 78 aa3□□□□□ -1.93
NPIPB4-210ENST00000539191 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
NPIPB4-210ENST00000539191 TRAV7A0A075B6U4 112 aa2.97□□□□□ -1.93
NPIPB4-210ENST00000539191 MT1MQ8N339 61 aa2.96□□□□□ -1.94
NPIPB4-210ENST00000539191 A0A0D9SG42 100 aa2.95□□□□□ -1.94
NPIPB4-210ENST00000539191 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
NPIPB4-210ENST00000539191 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
NPIPB4-210ENST00000539191 MT1GP13640 62 aa2.93□□□□□ -1.94
NPIPB4-210ENST00000539191 ROMO1P60602 79 aa2.93□□□□□ -1.94
NPIPB4-210ENST00000539191 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
NPIPB4-210ENST00000539191 H3BPC8 53 aa2.91□□□□□ -1.94
NPIPB4-210ENST00000539191 ACYP2P14621 99 aa2.91□□□□□ -1.94
NPIPB4-210ENST00000539191 MT1LQ93083 61 aa2.91□□□□□ -1.94
NPIPB4-210ENST00000539191 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
NPIPB4-210ENST00000539191 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
NPIPB4-210ENST00000539191 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
NPIPB4-210ENST00000539191 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
NPIPB4-210ENST00000539191 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
NPIPB4-210ENST00000539191 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
NPIPB4-210ENST00000539191 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
NPIPB4-210ENST00000539191 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
NPIPB4-210ENST00000539191 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
NPIPB4-210ENST00000539191 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
NPIPB4-210ENST00000539191 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
NPIPB4-210ENST00000539191 C10orf95Q9H7T3 257 aa2.83□□□□□ -1.96
NPIPB4-210ENST00000539191 A8MU10 97 aa2.82□□□□□ -1.96
NPIPB4-210ENST00000539191 PRR15LQ9BU68 103 aa2.82□□□□□ -1.96
NPIPB4-210ENST00000539191 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
NPIPB4-210ENST00000539191 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
NPIPB4-210ENST00000539191 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
NPIPB4-210ENST00000539191 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
NPIPB4-210ENST00000539191 COA5Q86WW8 74 aa2.72□□□□□ -1.97
NPIPB4-210ENST00000539191 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
NPIPB4-210ENST00000539191 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
NPIPB4-210ENST00000539191 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
NPIPB4-210ENST00000539191 A0A1B0GU33 70 aa2.7□□□□□ -1.98
NPIPB4-210ENST00000539191 UQCR11O14957 56 aa2.66□□□□□ -1.98
NPIPB4-210ENST00000539191 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
NPIPB4-210ENST00000539191 TNP1P09430 55 aa2.65□□□□□ -1.99
NPIPB4-210ENST00000539191 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
NPIPB4-210ENST00000539191 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
NPIPB4-210ENST00000539191 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
NPIPB4-210ENST00000539191 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
NPIPB4-210ENST00000539191 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
NPIPB4-210ENST00000539191 A0A1B0GU69 56 aa2.55□□□□□ -2
NPIPB4-210ENST00000539191 KRTAP5-8O75690 187 aa2.54□□□□□ -2
NPIPB4-210ENST00000539191 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
NPIPB4-210ENST00000539191 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
NPIPB4-210ENST00000539191 MT1AP04731 61 aa2.44□□□□□ -2.02
NPIPB4-210ENST00000539191 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
NPIPB4-210ENST00000539191 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
NPIPB4-210ENST00000539191 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
NPIPB4-210ENST00000539191 INE1O15225 51 aa2.38□□□□□ -2.03
NPIPB4-210ENST00000539191 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
NPIPB4-210ENST00000539191 MT3P25713 68 aa2.29□□□□□ -2.04
NPIPB4-210ENST00000539191 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
NPIPB4-210ENST00000539191 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
NPIPB4-210ENST00000539191 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
NPIPB4-210ENST00000539191 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
NPIPB4-210ENST00000539191 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
NPIPB4-210ENST00000539191 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NPIPB4-210ENST00000539191 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
NPIPB4-210ENST00000539191 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
NPIPB4-210ENST00000539191 LCE3EQ5T5B0 92 aa1.74□□□□□ -2.13
NPIPB4-210ENST00000539191 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
NPIPB4-210ENST00000539191 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
NPIPB4-210ENST00000539191 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
NPIPB4-210ENST00000539191 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NPIPB4-210ENST00000539191 PRM1P04553 51 aa1.24□□□□□ -2.21
NPIPB4-210ENST00000539191 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 85 ms