RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 INE1O15225 51 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 PCOTHQ58A44 107 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 IGFL1Q6UW32 110 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 SPINK1P00995 79 aa0.91□□□□□ -2.26
CBX3P4-201ENST00000538909 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
CBX3P4-201ENST00000538909 FSIP2Q5CZC0 6907 aa0.9□□□□□ -2.26
CBX3P4-201ENST00000538909 TP53AIP1Q9HCN2 124 aa0.9□□□□□ -2.27
CBX3P4-201ENST00000538909 K7EQZ3 153 aa0.89□□□□□ -2.27
CBX3P4-201ENST00000538909 KRTAP12-3P60328 96 aa0.88□□□□□ -2.27
CBX3P4-201ENST00000538909 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
CBX3P4-201ENST00000538909 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 DEFB105AQ8NG35 78 aa0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
CBX3P4-201ENST00000538909 H0YAA0 97 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 MT1HP80294 61 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 COX6B2Q6YFQ2 88 aa0.84□□□□□ -2.27
CBX3P4-201ENST00000538909 USH2AO75445 5202 aa0.84□□□□□ -2.28
CBX3P4-201ENST00000538909 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
CBX3P4-201ENST00000538909 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
CBX3P4-201ENST00000538909 H1FX-AS1Q4G0G2 97 aa0.83□□□□□ -2.28
CBX3P4-201ENST00000538909 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
CBX3P4-201ENST00000538909 NEBP20929 6669 aa0.81□□□□□ -2.28
CBX3P4-201ENST00000538909 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 MT2AP02795 61 aa0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 MT1FP04733 61 aa0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 KRTAP13-4Q3LI77 160 aa0.78□□□□□ -2.28
CBX3P4-201ENST00000538909 A0A0D9SG42 100 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP19-8Q3LI54 63 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 S4R3F8 94 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 MT1BP07438 61 aa0.76□□□□□ -2.29
CBX3P4-201ENST00000538909 SPRR2GQ9BYE4 73 aa0.76□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
CBX3P4-201ENST00000538909 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
CBX3P4-201ENST00000538909 KMT2DO14686 5537 aa0.74□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP12-1P59990 96 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 M0R2T5 61 aa0.72□□□□□ -2.29
CBX3P4-201ENST00000538909 MT1XP80297 61 aa0.72□□□□□ -2.29
CBX3P4-201ENST00000538909 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CBX3P4-201ENST00000538909 M0QZ58 72 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 KRTAP6-3Q3LI67 103 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 KRTAP19-7Q3SYF9 63 aa0.65□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1EP04732 61 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 TNP1P09430 55 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2EP22531 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2BP35325 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2AP35326 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1LQ93083 61 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2DP22532 72 aa0.6□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1MQ8N339 61 aa0.59□□□□□ -2.31
CBX3P4-201ENST00000538909 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
CBX3P4-201ENST00000538909 MT1GP13640 62 aa0.58□□□□□ -2.32
CBX3P4-201ENST00000538909 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
CBX3P4-201ENST00000538909 MT4P47944 62 aa0.56□□□□□ -2.32
CBX3P4-201ENST00000538909 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
CBX3P4-201ENST00000538909 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
CBX3P4-201ENST00000538909 MT1AP04731 61 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 PRM1P04553 51 aa0.5□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
CBX3P4-201ENST00000538909 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
CBX3P4-201ENST00000538909 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms