RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 INE1O15225 51 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 PCOTHQ58A44 107 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 IGFL1Q6UW32 110 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
CBX3P4-201ENST00000538909 SPINK1P00995 79 aa0.91□□□□□ -2.26
CBX3P4-201ENST00000538909 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
CBX3P4-201ENST00000538909 FSIP2Q5CZC0 6907 aa0.9□□□□□ -2.26
CBX3P4-201ENST00000538909 TP53AIP1Q9HCN2 124 aa0.9□□□□□ -2.27
CBX3P4-201ENST00000538909 K7EQZ3 153 aa0.89□□□□□ -2.27
CBX3P4-201ENST00000538909 KRTAP12-3P60328 96 aa0.88□□□□□ -2.27
CBX3P4-201ENST00000538909 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
CBX3P4-201ENST00000538909 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 DEFB105AQ8NG35 78 aa0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
CBX3P4-201ENST00000538909 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
CBX3P4-201ENST00000538909 H0YAA0 97 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 MT1HP80294 61 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
CBX3P4-201ENST00000538909 COX6B2Q6YFQ2 88 aa0.84□□□□□ -2.27
CBX3P4-201ENST00000538909 USH2AO75445 5202 aa0.84□□□□□ -2.28
CBX3P4-201ENST00000538909 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
CBX3P4-201ENST00000538909 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
CBX3P4-201ENST00000538909 H1FX-AS1Q4G0G2 97 aa0.83□□□□□ -2.28
CBX3P4-201ENST00000538909 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
CBX3P4-201ENST00000538909 NEBP20929 6669 aa0.81□□□□□ -2.28
CBX3P4-201ENST00000538909 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 MT2AP02795 61 aa0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 MT1FP04733 61 aa0.8□□□□□ -2.28
CBX3P4-201ENST00000538909 KRTAP13-4Q3LI77 160 aa0.78□□□□□ -2.28
CBX3P4-201ENST00000538909 A0A0D9SG42 100 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP19-8Q3LI54 63 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 S4R3F8 94 aa0.77□□□□□ -2.29
CBX3P4-201ENST00000538909 MT1BP07438 61 aa0.76□□□□□ -2.29
CBX3P4-201ENST00000538909 SPRR2GQ9BYE4 73 aa0.76□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
CBX3P4-201ENST00000538909 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
CBX3P4-201ENST00000538909 KMT2DO14686 5537 aa0.74□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP12-1P59990 96 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
CBX3P4-201ENST00000538909 M0R2T5 61 aa0.72□□□□□ -2.29
CBX3P4-201ENST00000538909 MT1XP80297 61 aa0.72□□□□□ -2.29
CBX3P4-201ENST00000538909 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
CBX3P4-201ENST00000538909 M0QZ58 72 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 KRTAP6-3Q3LI67 103 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
CBX3P4-201ENST00000538909 KRTAP19-7Q3SYF9 63 aa0.65□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1EP04732 61 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CBX3P4-201ENST00000538909 TNP1P09430 55 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2EP22531 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2BP35325 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2AP35326 72 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1LQ93083 61 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
CBX3P4-201ENST00000538909 SPRR2DP22532 72 aa0.6□□□□□ -2.31
CBX3P4-201ENST00000538909 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
CBX3P4-201ENST00000538909 MT1MQ8N339 61 aa0.59□□□□□ -2.31
CBX3P4-201ENST00000538909 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
CBX3P4-201ENST00000538909 MT1GP13640 62 aa0.58□□□□□ -2.32
CBX3P4-201ENST00000538909 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
CBX3P4-201ENST00000538909 MT4P47944 62 aa0.56□□□□□ -2.32
CBX3P4-201ENST00000538909 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
CBX3P4-201ENST00000538909 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
CBX3P4-201ENST00000538909 MT1AP04731 61 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
CBX3P4-201ENST00000538909 PRM1P04553 51 aa0.5□□□□□ -2.33
CBX3P4-201ENST00000538909 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
CBX3P4-201ENST00000538909 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
CBX3P4-201ENST00000538909 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms