RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
CD4-208ENST00000538827 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
CD4-208ENST00000538827 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
CD4-208ENST00000538827 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
CD4-208ENST00000538827 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
CD4-208ENST00000538827 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CD4-208ENST00000538827 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
CD4-208ENST00000538827 SPRR2DP22532 72 aa5.4□□□□□ -1.54
CD4-208ENST00000538827 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
CD4-208ENST00000538827 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
CD4-208ENST00000538827 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
CD4-208ENST00000538827 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
CD4-208ENST00000538827 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
CD4-208ENST00000538827 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
CD4-208ENST00000538827 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
CD4-208ENST00000538827 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
CD4-208ENST00000538827 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
CD4-208ENST00000538827 MT1EP04732 61 aa5.18□□□□□ -1.58
CD4-208ENST00000538827 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
CD4-208ENST00000538827 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
CD4-208ENST00000538827 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
CD4-208ENST00000538827 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
CD4-208ENST00000538827 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
CD4-208ENST00000538827 MT1LQ93083 61 aa5.04□□□□□ -1.6
CD4-208ENST00000538827 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
CD4-208ENST00000538827 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
CD4-208ENST00000538827 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
CD4-208ENST00000538827 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
CD4-208ENST00000538827 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
CD4-208ENST00000538827 MT1GP13640 62 aa4.93□□□□□ -1.62
CD4-208ENST00000538827 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CD4-208ENST00000538827 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
CD4-208ENST00000538827 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CD4-208ENST00000538827 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CD4-208ENST00000538827 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
CD4-208ENST00000538827 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
CD4-208ENST00000538827 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
CD4-208ENST00000538827 MT4P47944 62 aa4.74□□□□□ -1.65
CD4-208ENST00000538827 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
CD4-208ENST00000538827 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
CD4-208ENST00000538827 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
CD4-208ENST00000538827 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
CD4-208ENST00000538827 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
CD4-208ENST00000538827 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CD4-208ENST00000538827 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
CD4-208ENST00000538827 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
CD4-208ENST00000538827 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
CD4-208ENST00000538827 MT1AP04731 61 aa4.31□□□□□ -1.72
CD4-208ENST00000538827 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
CD4-208ENST00000538827 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
CD4-208ENST00000538827 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
CD4-208ENST00000538827 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
CD4-208ENST00000538827 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
CD4-208ENST00000538827 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
CD4-208ENST00000538827 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
CD4-208ENST00000538827 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
CD4-208ENST00000538827 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
CD4-208ENST00000538827 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CD4-208ENST00000538827 MT3P25713 68 aa3.9□□□□□ -1.79
CD4-208ENST00000538827 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
CD4-208ENST00000538827 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
CD4-208ENST00000538827 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
CD4-208ENST00000538827 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CD4-208ENST00000538827 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CD4-208ENST00000538827 INE1O15225 51 aa3.44□□□□□ -1.86
CD4-208ENST00000538827 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CD4-208ENST00000538827 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CD4-208ENST00000538827 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CD4-208ENST00000538827 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CD4-208ENST00000538827 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
CD4-208ENST00000538827 PRM1P04553 51 aa2.99□□□□□ -1.93
CD4-208ENST00000538827 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CD4-208ENST00000538827 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
CD4-208ENST00000538827 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CD4-208ENST00000538827 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CD4-208ENST00000538827 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CD4-208ENST00000538827 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CD4-208ENST00000538827 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 47.2 ms