RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 ARHGAP5-AS1Q96IT6 56 aa-0.41□□□□□ -2.48
MDM1-208ENST00000538454 EPPK1P58107 5090 aaKnown RBP-0.41□□□□□ -2.48
MDM1-208ENST00000538454 ITPR2Q14571 2701 aa-0.42□□□□□ -2.48
MDM1-208ENST00000538454 CEP295Q9C0D2 2601 aa-0.42□□□□□ -2.48
MDM1-208ENST00000538454 A0A096LNI7 61 aa-0.43□□□□□ -2.48
MDM1-208ENST00000538454 MT1HL1P0DM35 61 aa-0.43□□□□□ -2.48
MDM1-208ENST00000538454 TLN1Q9Y490 2541 aaKnown RBP-0.43□□□□□ -2.48
MDM1-208ENST00000538454 MT1MQ8N339 61 aa-0.44□□□□□ -2.48
MDM1-208ENST00000538454 HYDINQ4G0P3 5121 aa-0.44□□□□□ -2.48
MDM1-208ENST00000538454 CEP250Q9BV73 2442 aa-0.45□□□□□ -2.48
MDM1-208ENST00000538454 MT2AP02795 61 aa-0.45□□□□□ -2.48
MDM1-208ENST00000538454 CSMD2Q7Z408 3487 aa-0.45□□□□□ -2.48
MDM1-208ENST00000538454 ATMQ13315 3056 aa-0.45□□□□□ -2.48
MDM1-208ENST00000538454 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
MDM1-208ENST00000538454 SMG1Q96Q15 3661 aaKnown RBP-0.45□□□□□ -2.48
MDM1-208ENST00000538454 VPS13CQ709C8 3753 aa-0.46□□□□□ -2.48
MDM1-208ENST00000538454 BIRC6Q9NR09 4857 aa-0.46□□□□□ -2.48
MDM1-208ENST00000538454 K7EIM0 57 aa-0.47□□□□□ -2.48
MDM1-208ENST00000538454 PRCDQ00LT1 54 aa-0.47□□□□□ -2.48
MDM1-208ENST00000538454 PRUNE2Q8WUY3 3088 aa-0.47□□□□□ -2.49
MDM1-208ENST00000538454 MYO15AQ9UKN7 3530 aa-0.47□□□□□ -2.49
MDM1-208ENST00000538454 DEFB133Q30KQ1 61 aa-0.49□□□□□ -2.49
MDM1-208ENST00000538454 KIAA1109Q2LD37 5005 aa-0.49□□□□□ -2.49
MDM1-208ENST00000538454 HTN1P15515 57 aa-0.5□□□□□ -2.49
MDM1-208ENST00000538454 DEFB124Q8NES8 71 aa-0.5□□□□□ -2.49
MDM1-208ENST00000538454 FRYLO94915 3013 aa-0.5□□□□□ -2.49
MDM1-208ENST00000538454 DMDP11532 3685 aa-0.51□□□□□ -2.49
MDM1-208ENST00000538454 TTTY10Q9BZA0 68 aa-0.51□□□□□ -2.49
MDM1-208ENST00000538454 RYR2Q92736 4967 aa-0.51□□□□□ -2.49
MDM1-208ENST00000538454 RPS29P62273 56 aaKnown RBP-0.53□□□□□ -2.49
MDM1-208ENST00000538454 H3BUX3 64 aa-0.54□□□□□ -2.5
MDM1-208ENST00000538454 DNAH12Q6ZR08 3092 aa-0.54□□□□□ -2.5
MDM1-208ENST00000538454 FREM2Q5SZK8 3169 aa-0.55□□□□□ -2.5
MDM1-208ENST00000538454 H3BSH0 61 aa-0.55□□□□□ -2.5
MDM1-208ENST00000538454 PCNTO95613 3336 aa-0.56□□□□□ -2.5
MDM1-208ENST00000538454 CEP350Q5VT06 3117 aa-0.56□□□□□ -2.5
MDM1-208ENST00000538454 MT1BP07438 61 aa-0.57□□□□□ -2.5
MDM1-208ENST00000538454 WDFY4Q6ZS81 3184 aa-0.57□□□□□ -2.5
MDM1-208ENST00000538454 TMEM167AQ8TBQ9 72 aa-0.58□□□□□ -2.5
MDM1-208ENST00000538454 MUC3AQ02505 3323 aa-0.59□□□□□ -2.5
MDM1-208ENST00000538454 SZT2Q5T011 3432 aa-0.6□□□□□ -2.51
MDM1-208ENST00000538454 XIRP2A4UGR9 3374 aa-0.6□□□□□ -2.51
MDM1-208ENST00000538454 CD52P31358 61 aa-0.61□□□□□ -2.51
MDM1-208ENST00000538454 ABCA13Q86UQ4 5058 aa-0.61□□□□□ -2.51
MDM1-208ENST00000538454 BOD1L1Q8NFC6 3051 aa-0.62□□□□□ -2.51
MDM1-208ENST00000538454 MKI67P46013 3256 aaKnown RBP-0.63□□□□□ -2.51
MDM1-208ENST00000538454 DCHS1Q96JQ0 3298 aa-0.64□□□□□ -2.51
MDM1-208ENST00000538454 RPL39P5Q59GN2 51 aa-0.65□□□□□ -2.51
MDM1-208ENST00000538454 MT1FP04733 61 aa-0.66□□□□□ -2.52
MDM1-208ENST00000538454 WDFY3Q8IZQ1 3526 aa-0.67□□□□□ -2.52
MDM1-208ENST00000538454 CENPEQ02224 2701 aa-0.69□□□□□ -2.52
MDM1-208ENST00000538454 DEFB108AA8MXU0 73 aa-0.69□□□□□ -2.52
MDM1-208ENST00000538454 LINC01556Q5JQF7 62 aa-0.7□□□□□ -2.52
MDM1-208ENST00000538454 LOC400499M0QZD8 3231 aa-0.72□□□□□ -2.52
MDM1-208ENST00000538454 SPEGQ15772 3267 aa-0.72□□□□□ -2.52
MDM1-208ENST00000538454 APELAP0DMC3 54 aa-0.73□□□□□ -2.53
MDM1-208ENST00000538454 EP400Q96L91 3159 aa-0.74□□□□□ -2.53
MDM1-208ENST00000538454 A0A096LPF7 62 aa-0.75□□□□□ -2.53
MDM1-208ENST00000538454 KRTAP20-1Q3LI63 56 aa-0.76□□□□□ -2.53
MDM1-208ENST00000538454 UNC80Q8N2C7 3258 aa-0.77□□□□□ -2.53
MDM1-208ENST00000538454 ASPMQ8IZT6 3477 aa-0.78□□□□□ -2.53
MDM1-208ENST00000538454 KRTAP19-2Q3LHN2 52 aa-0.8□□□□□ -2.54
MDM1-208ENST00000538454 CFAP47Q6ZTR5 3102 aa-0.81□□□□□ -2.54
MDM1-208ENST00000538454 KRTAP19-6Q3LI70 58 aa-0.81□□□□□ -2.54
MDM1-208ENST00000538454 USP34Q70CQ2 3546 aa-0.81□□□□□ -2.54
MDM1-208ENST00000538454 BRCA2P51587 3418 aa-0.85□□□□□ -2.54
MDM1-208ENST00000538454 Q9Y3F1 56 aa-0.9□□□□□ -2.55
MDM1-208ENST00000538454 CENPFP49454 3210 aa-0.92□□□□□ -2.56
MDM1-208ENST00000538454 VCANP13611 3396 aa-0.92□□□□□ -2.56
MDM1-208ENST00000538454 HTN3P15516 51 aa-0.92□□□□□ -2.56
MDM1-208ENST00000538454 DNAH14Q0VDD8 3507 aa-0.93□□□□□ -2.56
MDM1-208ENST00000538454 DEFB108BQ8NET1 73 aa-0.98□□□□□ -2.57
MDM1-208ENST00000538454 UTRNP46939 3433 aa-1.01□□□□□ -2.57
MDM1-208ENST00000538454 CDH23Q9H251 3354 aa-1.02□□□□□ -2.57
MDM1-208ENST00000538454 VPS13AQ96RL7 3174 aa-1.04□□□□□ -2.58
MDM1-208ENST00000538454 COX14Q96I36 57 aa-1.05□□□□□ -2.58
MDM1-208ENST00000538454 GOLGB1Q14789 3259 aaKnown RBP-1.06□□□□□ -2.58
MDM1-208ENST00000538454 STATHP02808 62 aa-1.1□□□□□ -2.59
Retrieved 78 of 20,778 RNA–protein pairs in 66.9 ms