RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 NEBP20929 6669 aa3.2□□□□□ -1.9
CD9-207ENST00000538418 NREPQ16612 68 aa3.19□□□□□ -1.9
CD9-207ENST00000538418 WFDC13Q8IUB5 93 aa3.19□□□□□ -1.9
CD9-207ENST00000538418 H1FX-AS1Q4G0G2 97 aa3.18□□□□□ -1.9
CD9-207ENST00000538418 Q5VV11 94 aa3.16□□□□□ -1.9
CD9-207ENST00000538418 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
CD9-207ENST00000538418 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
CD9-207ENST00000538418 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
CD9-207ENST00000538418 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CD9-207ENST00000538418 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CD9-207ENST00000538418 MMP24-AS1A0A0U1RRL7 71 aa3.06□□□□□ -1.92
CD9-207ENST00000538418 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
CD9-207ENST00000538418 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
CD9-207ENST00000538418 KMT2DO14686 5537 aa3.04□□□□□ -1.92
CD9-207ENST00000538418 LINC01558Q9Y6Z2 57 aa3.04□□□□□ -1.92
CD9-207ENST00000538418 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
CD9-207ENST00000538418 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CD9-207ENST00000538418 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
CD9-207ENST00000538418 CRIPTQ9P021 101 aa3.02□□□□□ -1.93
CD9-207ENST00000538418 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
CD9-207ENST00000538418 K7EQZ3 153 aa3.01□□□□□ -1.93
CD9-207ENST00000538418 MT1BP07438 61 aa3□□□□□ -1.93
CD9-207ENST00000538418 H0Y9P7 68 aa2.99□□□□□ -1.93
CD9-207ENST00000538418 S4R3F8 94 aa2.99□□□□□ -1.93
CD9-207ENST00000538418 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
CD9-207ENST00000538418 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
CD9-207ENST00000538418 TP53AIP1Q9HCN2 124 aa2.96□□□□□ -1.94
CD9-207ENST00000538418 UQCR11O14957 56 aa2.94□□□□□ -1.94
CD9-207ENST00000538418 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
CD9-207ENST00000538418 H0YAA0 97 aa2.91□□□□□ -1.94
CD9-207ENST00000538418 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
CD9-207ENST00000538418 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
CD9-207ENST00000538418 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
CD9-207ENST00000538418 A0A1B0GU69 56 aa2.85□□□□□ -1.95
CD9-207ENST00000538418 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CD9-207ENST00000538418 SPRR2EP22531 72 aa2.84□□□□□ -1.95
CD9-207ENST00000538418 SPRR2BP35325 72 aa2.84□□□□□ -1.95
CD9-207ENST00000538418 SPRR2AP35326 72 aa2.84□□□□□ -1.95
CD9-207ENST00000538418 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
CD9-207ENST00000538418 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
CD9-207ENST00000538418 ACYP2P14621 99 aa2.81□□□□□ -1.96
CD9-207ENST00000538418 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
CD9-207ENST00000538418 MT1XP80297 61 aa2.79□□□□□ -1.96
CD9-207ENST00000538418 SPRR2DP22532 72 aa2.75□□□□□ -1.97
CD9-207ENST00000538418 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
CD9-207ENST00000538418 M0QZ58 72 aa2.69□□□□□ -1.98
CD9-207ENST00000538418 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
CD9-207ENST00000538418 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
CD9-207ENST00000538418 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
CD9-207ENST00000538418 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
CD9-207ENST00000538418 A0A0D9SG42 100 aa2.5□□□□□ -2.01
CD9-207ENST00000538418 MT1GP13640 62 aa2.5□□□□□ -2.01
CD9-207ENST00000538418 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
CD9-207ENST00000538418 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CD9-207ENST00000538418 MT1EP04732 61 aa2.49□□□□□ -2.01
CD9-207ENST00000538418 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.03
CD9-207ENST00000538418 MT4P47944 62 aa2.39□□□□□ -2.03
CD9-207ENST00000538418 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
CD9-207ENST00000538418 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
CD9-207ENST00000538418 MT1MQ8N339 61 aa2.37□□□□□ -2.03
CD9-207ENST00000538418 MT1LQ93083 61 aa2.36□□□□□ -2.03
CD9-207ENST00000538418 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CD9-207ENST00000538418 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CD9-207ENST00000538418 TNP1P09430 55 aa2.3□□□□□ -2.04
CD9-207ENST00000538418 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
CD9-207ENST00000538418 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CD9-207ENST00000538418 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
CD9-207ENST00000538418 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
CD9-207ENST00000538418 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
CD9-207ENST00000538418 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CD9-207ENST00000538418 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
CD9-207ENST00000538418 MT1AP04731 61 aa2.02□□□□□ -2.09
CD9-207ENST00000538418 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
CD9-207ENST00000538418 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
CD9-207ENST00000538418 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CD9-207ENST00000538418 PRM1P04553 51 aa1.37□□□□□ -2.19
CD9-207ENST00000538418 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CD9-207ENST00000538418 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms