RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
VPS37C-204ENST00000538036 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
VPS37C-204ENST00000538036 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
VPS37C-204ENST00000538036 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
VPS37C-204ENST00000538036 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
VPS37C-204ENST00000538036 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
VPS37C-204ENST00000538036 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
VPS37C-204ENST00000538036 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
VPS37C-204ENST00000538036 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
VPS37C-204ENST00000538036 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
VPS37C-204ENST00000538036 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
VPS37C-204ENST00000538036 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
VPS37C-204ENST00000538036 MT1EP04732 61 aa3.82□□□□□ -1.8
VPS37C-204ENST00000538036 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
VPS37C-204ENST00000538036 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
VPS37C-204ENST00000538036 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
VPS37C-204ENST00000538036 MT1GP13640 62 aa3.77□□□□□ -1.81
VPS37C-204ENST00000538036 MT4P47944 62 aa3.77□□□□□ -1.81
VPS37C-204ENST00000538036 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
VPS37C-204ENST00000538036 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
VPS37C-204ENST00000538036 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
VPS37C-204ENST00000538036 H3BS24 57 aa3.74□□□□□ -1.81
VPS37C-204ENST00000538036 TNP1P09430 55 aa3.68□□□□□ -1.82
VPS37C-204ENST00000538036 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
VPS37C-204ENST00000538036 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
VPS37C-204ENST00000538036 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
VPS37C-204ENST00000538036 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
VPS37C-204ENST00000538036 MT1MQ8N339 61 aa3.65□□□□□ -1.83
VPS37C-204ENST00000538036 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
VPS37C-204ENST00000538036 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
VPS37C-204ENST00000538036 MT1LQ93083 61 aa3.6□□□□□ -1.83
VPS37C-204ENST00000538036 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
VPS37C-204ENST00000538036 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
VPS37C-204ENST00000538036 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
VPS37C-204ENST00000538036 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
VPS37C-204ENST00000538036 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
VPS37C-204ENST00000538036 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
VPS37C-204ENST00000538036 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
VPS37C-204ENST00000538036 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
VPS37C-204ENST00000538036 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
VPS37C-204ENST00000538036 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
VPS37C-204ENST00000538036 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
VPS37C-204ENST00000538036 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
VPS37C-204ENST00000538036 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
VPS37C-204ENST00000538036 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
VPS37C-204ENST00000538036 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
VPS37C-204ENST00000538036 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
VPS37C-204ENST00000538036 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
VPS37C-204ENST00000538036 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.9
VPS37C-204ENST00000538036 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
VPS37C-204ENST00000538036 INE1O15225 51 aa3.12□□□□□ -1.91
VPS37C-204ENST00000538036 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
VPS37C-204ENST00000538036 MT1AP04731 61 aa3.07□□□□□ -1.92
VPS37C-204ENST00000538036 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
VPS37C-204ENST00000538036 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
VPS37C-204ENST00000538036 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
VPS37C-204ENST00000538036 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
VPS37C-204ENST00000538036 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
VPS37C-204ENST00000538036 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
VPS37C-204ENST00000538036 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
VPS37C-204ENST00000538036 MT3P25713 68 aa2.84□□□□□ -1.95
VPS37C-204ENST00000538036 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
VPS37C-204ENST00000538036 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
VPS37C-204ENST00000538036 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
VPS37C-204ENST00000538036 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
VPS37C-204ENST00000538036 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
VPS37C-204ENST00000538036 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
VPS37C-204ENST00000538036 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
VPS37C-204ENST00000538036 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
VPS37C-204ENST00000538036 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
VPS37C-204ENST00000538036 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
VPS37C-204ENST00000538036 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
VPS37C-204ENST00000538036 PRM1P04553 51 aa2.17□□□□□ -2.06
VPS37C-204ENST00000538036 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
VPS37C-204ENST00000538036 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
VPS37C-204ENST00000538036 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
VPS37C-204ENST00000538036 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
VPS37C-204ENST00000538036 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms