RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 LINC00643Q86TS7 51 aa1.17□□□□□ -2.22
TNFRSF1A-210ENST00000537842 H7BZZ5 65 aa1.16□□□□□ -2.22
TNFRSF1A-210ENST00000537842 ACYP2P14621 99 aa1.16□□□□□ -2.22
TNFRSF1A-210ENST00000537842 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
TNFRSF1A-210ENST00000537842 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
TNFRSF1A-210ENST00000537842 H1FX-AS1Q4G0G2 97 aa1.15□□□□□ -2.23
TNFRSF1A-210ENST00000537842 Q5VV11 94 aa1.15□□□□□ -2.23
TNFRSF1A-210ENST00000537842 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
TNFRSF1A-210ENST00000537842 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
TNFRSF1A-210ENST00000537842 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
TNFRSF1A-210ENST00000537842 LINC01558Q9Y6Z2 57 aa1.13□□□□□ -2.23
TNFRSF1A-210ENST00000537842 MT1BP07438 61 aa1.12□□□□□ -2.23
TNFRSF1A-210ENST00000537842 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
TNFRSF1A-210ENST00000537842 ATP5EP2Q5VTU8 51 aa1.12□□□□□ -2.23
TNFRSF1A-210ENST00000537842 PRR15LQ9BU68 103 aa1.12□□□□□ -2.23
TNFRSF1A-210ENST00000537842 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
TNFRSF1A-210ENST00000537842 SPRR2GQ9BYE4 73 aa1.11□□□□□ -2.23
TNFRSF1A-210ENST00000537842 TP53AIP1Q9HCN2 124 aa1.11□□□□□ -2.23
TNFRSF1A-210ENST00000537842 H0Y9P7 68 aa1.1□□□□□ -2.23
TNFRSF1A-210ENST00000537842 KRTAP19-8Q3LI54 63 aa1.1□□□□□ -2.23
TNFRSF1A-210ENST00000537842 S4R3F8 94 aa1.09□□□□□ -2.23
TNFRSF1A-210ENST00000537842 NEBP20929 6669 aa1.08□□□□□ -2.24
TNFRSF1A-210ENST00000537842 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
TNFRSF1A-210ENST00000537842 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
TNFRSF1A-210ENST00000537842 PLAC4Q8WY50 150 aa1.08□□□□□ -2.24
TNFRSF1A-210ENST00000537842 MT1XP80297 61 aa1.06□□□□□ -2.24
TNFRSF1A-210ENST00000537842 H0YAA0 97 aa1.05□□□□□ -2.24
TNFRSF1A-210ENST00000537842 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
TNFRSF1A-210ENST00000537842 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
TNFRSF1A-210ENST00000537842 A0A1B0GU69 56 aa1.03□□□□□ -2.24
TNFRSF1A-210ENST00000537842 SPATA8Q6RVD6 105 aa1.02□□□□□ -2.25
TNFRSF1A-210ENST00000537842 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
TNFRSF1A-210ENST00000537842 KRTAP12-1P59990 96 aa1.01□□□□□ -2.25
TNFRSF1A-210ENST00000537842 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
TNFRSF1A-210ENST00000537842 M0QZ58 72 aa0.99□□□□□ -2.25
TNFRSF1A-210ENST00000537842 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
TNFRSF1A-210ENST00000537842 SPRR2FQ96RM1 72 aa0.97□□□□□ -2.25
TNFRSF1A-210ENST00000537842 A0A0D9SG42 100 aa0.95□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
TNFRSF1A-210ENST00000537842 C10orf95Q9H7T3 257 aa0.95□□□□□ -2.26
TNFRSF1A-210ENST00000537842 HMCN1Q96RW7 5635 aa0.94□□□□□ -2.26
TNFRSF1A-210ENST00000537842 SPRR2EP22531 72 aa0.94□□□□□ -2.26
TNFRSF1A-210ENST00000537842 SPRR2BP35325 72 aa0.94□□□□□ -2.26
TNFRSF1A-210ENST00000537842 SPRR2AP35326 72 aa0.94□□□□□ -2.26
TNFRSF1A-210ENST00000537842 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
TNFRSF1A-210ENST00000537842 MT1EP04732 61 aa0.93□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
TNFRSF1A-210ENST00000537842 GPR98Q8WXG9 6306 aa0.92□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP12-4P60329 112 aa0.92□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP19-5Q3LI72 72 aa0.92□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
TNFRSF1A-210ENST00000537842 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
TNFRSF1A-210ENST00000537842 SPRR2DP22532 72 aa0.9□□□□□ -2.27
TNFRSF1A-210ENST00000537842 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
TNFRSF1A-210ENST00000537842 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
TNFRSF1A-210ENST00000537842 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
TNFRSF1A-210ENST00000537842 MT1LQ93083 61 aa0.89□□□□□ -2.27
TNFRSF1A-210ENST00000537842 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
TNFRSF1A-210ENST00000537842 MT1MQ8N339 61 aa0.87□□□□□ -2.27
TNFRSF1A-210ENST00000537842 MT1GP13640 62 aa0.86□□□□□ -2.27
TNFRSF1A-210ENST00000537842 KRTAP5-8O75690 187 aa0.84□□□□□ -2.27
TNFRSF1A-210ENST00000537842 TNP1P09430 55 aa0.84□□□□□ -2.27
TNFRSF1A-210ENST00000537842 MT4P47944 62 aa0.81□□□□□ -2.28
TNFRSF1A-210ENST00000537842 MUC5ACP98088 5654 aa0.78□□□□□ -2.28
TNFRSF1A-210ENST00000537842 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
TNFRSF1A-210ENST00000537842 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
TNFRSF1A-210ENST00000537842 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
TNFRSF1A-210ENST00000537842 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
TNFRSF1A-210ENST00000537842 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
TNFRSF1A-210ENST00000537842 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
TNFRSF1A-210ENST00000537842 MT1AP04731 61 aa0.73□□□□□ -2.29
TNFRSF1A-210ENST00000537842 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
TNFRSF1A-210ENST00000537842 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
TNFRSF1A-210ENST00000537842 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
TNFRSF1A-210ENST00000537842 PRM1P04553 51 aa0.45□□□□□ -2.34
TNFRSF1A-210ENST00000537842 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms