RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
LMO3-216ENST00000537568 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
LMO3-216ENST00000537568 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
LMO3-216ENST00000537568 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
LMO3-216ENST00000537568 COX6B2Q6YFQ2 88 aa4.08□□□□□ -1.76
LMO3-216ENST00000537568 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
LMO3-216ENST00000537568 H0YAA0 97 aa4.06□□□□□ -1.76
LMO3-216ENST00000537568 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
LMO3-216ENST00000537568 LCE3AQ5TA76 89 aa4□□□□□ -1.77
LMO3-216ENST00000537568 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
LMO3-216ENST00000537568 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
LMO3-216ENST00000537568 ROMO1P60602 79 aa3.98□□□□□ -1.77
LMO3-216ENST00000537568 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
LMO3-216ENST00000537568 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
LMO3-216ENST00000537568 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
LMO3-216ENST00000537568 MT2AP02795 61 aa3.92□□□□□ -1.78
LMO3-216ENST00000537568 MT1FP04733 61 aa3.91□□□□□ -1.78
LMO3-216ENST00000537568 S4R3F8 94 aa3.88□□□□□ -1.79
LMO3-216ENST00000537568 M0QZ58 72 aa3.87□□□□□ -1.79
LMO3-216ENST00000537568 R4GN34 69 aa3.86□□□□□ -1.79
LMO3-216ENST00000537568 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
LMO3-216ENST00000537568 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
LMO3-216ENST00000537568 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
LMO3-216ENST00000537568 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
LMO3-216ENST00000537568 A0A0D9SG42 100 aa3.72□□□□□ -1.81
LMO3-216ENST00000537568 P0C880 135 aa3.72□□□□□ -1.81
LMO3-216ENST00000537568 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
LMO3-216ENST00000537568 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
LMO3-216ENST00000537568 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
LMO3-216ENST00000537568 SPRR2EP22531 72 aa3.68□□□□□ -1.82
LMO3-216ENST00000537568 SPRR2BP35325 72 aa3.68□□□□□ -1.82
LMO3-216ENST00000537568 SPRR2AP35326 72 aa3.68□□□□□ -1.82
LMO3-216ENST00000537568 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
LMO3-216ENST00000537568 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
LMO3-216ENST00000537568 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
LMO3-216ENST00000537568 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
LMO3-216ENST00000537568 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
LMO3-216ENST00000537568 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
LMO3-216ENST00000537568 SPRR2DP22532 72 aa3.55□□□□□ -1.84
LMO3-216ENST00000537568 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
LMO3-216ENST00000537568 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
LMO3-216ENST00000537568 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
LMO3-216ENST00000537568 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
LMO3-216ENST00000537568 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
LMO3-216ENST00000537568 TNP1P09430 55 aa3.4□□□□□ -1.87
LMO3-216ENST00000537568 MT1BP07438 61 aa3.38□□□□□ -1.87
LMO3-216ENST00000537568 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
LMO3-216ENST00000537568 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
LMO3-216ENST00000537568 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
LMO3-216ENST00000537568 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
LMO3-216ENST00000537568 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
LMO3-216ENST00000537568 MT4P47944 62 aa3.21□□□□□ -1.9
LMO3-216ENST00000537568 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
LMO3-216ENST00000537568 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
LMO3-216ENST00000537568 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
LMO3-216ENST00000537568 INE1O15225 51 aa3.15□□□□□ -1.91
LMO3-216ENST00000537568 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
LMO3-216ENST00000537568 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
LMO3-216ENST00000537568 MT1XP80297 61 aa2.96□□□□□ -1.94
LMO3-216ENST00000537568 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
LMO3-216ENST00000537568 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
LMO3-216ENST00000537568 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
LMO3-216ENST00000537568 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
LMO3-216ENST00000537568 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
LMO3-216ENST00000537568 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
LMO3-216ENST00000537568 MT1EP04732 61 aa2.66□□□□□ -1.98
LMO3-216ENST00000537568 MT1GP13640 62 aa2.62□□□□□ -1.99
LMO3-216ENST00000537568 MT1MQ8N339 61 aa2.58□□□□□ -2
LMO3-216ENST00000537568 MT1LQ93083 61 aa2.56□□□□□ -2
LMO3-216ENST00000537568 KRTAP12-4P60329 112 aa2.55□□□□□ -2
LMO3-216ENST00000537568 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
LMO3-216ENST00000537568 MT1AP04731 61 aa2.37□□□□□ -2.03
LMO3-216ENST00000537568 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
LMO3-216ENST00000537568 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
LMO3-216ENST00000537568 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
LMO3-216ENST00000537568 PRM1P04553 51 aa2.03□□□□□ -2.08
LMO3-216ENST00000537568 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LMO3-216ENST00000537568 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 46.2 ms