RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
CPSF7-217ENST00000537162 Q5W150 140 aa3.52□□□□□ -1.85
CPSF7-217ENST00000537162 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
CPSF7-217ENST00000537162 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CPSF7-217ENST00000537162 A8MUN3 132 aa3.5□□□□□ -1.85
CPSF7-217ENST00000537162 H0YAA0 97 aa3.5□□□□□ -1.85
CPSF7-217ENST00000537162 Q1T7F1 81 aa3.48□□□□□ -1.85
CPSF7-217ENST00000537162 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
CPSF7-217ENST00000537162 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
CPSF7-217ENST00000537162 MT1GP13640 62 aa3.44□□□□□ -1.86
CPSF7-217ENST00000537162 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
CPSF7-217ENST00000537162 MT1MQ8N339 61 aa3.43□□□□□ -1.86
CPSF7-217ENST00000537162 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
CPSF7-217ENST00000537162 COA5Q86WW8 74 aa3.42□□□□□ -1.86
CPSF7-217ENST00000537162 ACYP2P14621 99 aa3.39□□□□□ -1.87
CPSF7-217ENST00000537162 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
CPSF7-217ENST00000537162 PSPHP1O15172 72 aa3.37□□□□□ -1.87
CPSF7-217ENST00000537162 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
CPSF7-217ENST00000537162 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
CPSF7-217ENST00000537162 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
CPSF7-217ENST00000537162 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
CPSF7-217ENST00000537162 A6NED7 52 aa3.32□□□□□ -1.88
CPSF7-217ENST00000537162 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
CPSF7-217ENST00000537162 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
CPSF7-217ENST00000537162 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
CPSF7-217ENST00000537162 A0A1B0GU69 56 aa3.27□□□□□ -1.89
CPSF7-217ENST00000537162 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
CPSF7-217ENST00000537162 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
CPSF7-217ENST00000537162 MT1LQ93083 61 aa3.25□□□□□ -1.89
CPSF7-217ENST00000537162 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
CPSF7-217ENST00000537162 LINC01554Q52M75 96 aa3.23□□□□□ -1.89
CPSF7-217ENST00000537162 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
CPSF7-217ENST00000537162 R4GN34 69 aa3.23□□□□□ -1.89
CPSF7-217ENST00000537162 UQCR11O14957 56 aa3.22□□□□□ -1.89
CPSF7-217ENST00000537162 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
CPSF7-217ENST00000537162 M0QZ58 72 aa3.21□□□□□ -1.9
CPSF7-217ENST00000537162 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CPSF7-217ENST00000537162 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
CPSF7-217ENST00000537162 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CPSF7-217ENST00000537162 P0C880 135 aa3.17□□□□□ -1.9
CPSF7-217ENST00000537162 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CPSF7-217ENST00000537162 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
CPSF7-217ENST00000537162 A8MU10 97 aa3.14□□□□□ -1.91
CPSF7-217ENST00000537162 K7ERS5 55 aa3.09□□□□□ -1.91
CPSF7-217ENST00000537162 A0A1B0GU33 70 aa3.08□□□□□ -1.92
CPSF7-217ENST00000537162 A0A0D9SG42 100 aa2.99□□□□□ -1.93
CPSF7-217ENST00000537162 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
CPSF7-217ENST00000537162 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
CPSF7-217ENST00000537162 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CPSF7-217ENST00000537162 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CPSF7-217ENST00000537162 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
CPSF7-217ENST00000537162 ROMO1P60602 79 aa2.9□□□□□ -1.95
CPSF7-217ENST00000537162 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
CPSF7-217ENST00000537162 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CPSF7-217ENST00000537162 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
CPSF7-217ENST00000537162 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
CPSF7-217ENST00000537162 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
CPSF7-217ENST00000537162 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
CPSF7-217ENST00000537162 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CPSF7-217ENST00000537162 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
CPSF7-217ENST00000537162 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
CPSF7-217ENST00000537162 MT1AP04731 61 aa2.72□□□□□ -1.97
CPSF7-217ENST00000537162 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
CPSF7-217ENST00000537162 TNP1P09430 55 aa2.7□□□□□ -1.98
CPSF7-217ENST00000537162 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CPSF7-217ENST00000537162 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
CPSF7-217ENST00000537162 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CPSF7-217ENST00000537162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CPSF7-217ENST00000537162 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CPSF7-217ENST00000537162 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CPSF7-217ENST00000537162 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
CPSF7-217ENST00000537162 INE1O15225 51 aa2.27□□□□□ -2.05
CPSF7-217ENST00000537162 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
CPSF7-217ENST00000537162 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CPSF7-217ENST00000537162 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CPSF7-217ENST00000537162 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
CPSF7-217ENST00000537162 PRM1P04553 51 aa1.5□□□□□ -2.17
CPSF7-217ENST00000537162 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms