RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
IFT88-207ENST00000537103 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
IFT88-207ENST00000537103 MT1XP80297 61 aa2.74□□□□□ -1.97
IFT88-207ENST00000537103 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
IFT88-207ENST00000537103 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
IFT88-207ENST00000537103 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
IFT88-207ENST00000537103 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
IFT88-207ENST00000537103 INE1O15225 51 aa2.69□□□□□ -1.98
IFT88-207ENST00000537103 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
IFT88-207ENST00000537103 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
IFT88-207ENST00000537103 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
IFT88-207ENST00000537103 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
IFT88-207ENST00000537103 TNP1P09430 55 aa2.57□□□□□ -2
IFT88-207ENST00000537103 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
IFT88-207ENST00000537103 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
IFT88-207ENST00000537103 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
IFT88-207ENST00000537103 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
IFT88-207ENST00000537103 PP632Q6XCG6 107 aa2.53□□□□□ -2.01
IFT88-207ENST00000537103 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
IFT88-207ENST00000537103 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
IFT88-207ENST00000537103 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
IFT88-207ENST00000537103 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
IFT88-207ENST00000537103 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
IFT88-207ENST00000537103 MT1EP04732 61 aa2.44□□□□□ -2.02
IFT88-207ENST00000537103 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
IFT88-207ENST00000537103 SPRR2EP22531 72 aa2.42□□□□□ -2.02
IFT88-207ENST00000537103 SPRR2BP35325 72 aa2.42□□□□□ -2.02
IFT88-207ENST00000537103 SPRR2AP35326 72 aa2.42□□□□□ -2.02
IFT88-207ENST00000537103 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.02
IFT88-207ENST00000537103 NEBP20929 6669 aa2.4□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
IFT88-207ENST00000537103 MT1GP13640 62 aa2.39□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
IFT88-207ENST00000537103 KMT2DO14686 5537 aa2.38□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
IFT88-207ENST00000537103 MT1LQ93083 61 aa2.36□□□□□ -2.03
IFT88-207ENST00000537103 SPRR2DP22532 72 aa2.35□□□□□ -2.03
IFT88-207ENST00000537103 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.03
IFT88-207ENST00000537103 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
IFT88-207ENST00000537103 MT1MQ8N339 61 aa2.3□□□□□ -2.04
IFT88-207ENST00000537103 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
IFT88-207ENST00000537103 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
IFT88-207ENST00000537103 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
IFT88-207ENST00000537103 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
IFT88-207ENST00000537103 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
IFT88-207ENST00000537103 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
IFT88-207ENST00000537103 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
IFT88-207ENST00000537103 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
IFT88-207ENST00000537103 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
IFT88-207ENST00000537103 MT1AP04731 61 aa2.05□□□□□ -2.08
IFT88-207ENST00000537103 KRTAP9-6A8MVA2 160 aa2.04□□□□□ -2.08
IFT88-207ENST00000537103 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
IFT88-207ENST00000537103 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
IFT88-207ENST00000537103 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
IFT88-207ENST00000537103 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
IFT88-207ENST00000537103 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
IFT88-207ENST00000537103 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
IFT88-207ENST00000537103 MT4P47944 62 aa1.94□□□□□ -2.1
IFT88-207ENST00000537103 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
IFT88-207ENST00000537103 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
IFT88-207ENST00000537103 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
IFT88-207ENST00000537103 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
IFT88-207ENST00000537103 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
IFT88-207ENST00000537103 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
IFT88-207ENST00000537103 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
IFT88-207ENST00000537103 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
IFT88-207ENST00000537103 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
IFT88-207ENST00000537103 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
IFT88-207ENST00000537103 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
IFT88-207ENST00000537103 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
IFT88-207ENST00000537103 PRM1P04553 51 aa1.51□□□□□ -2.17
IFT88-207ENST00000537103 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
IFT88-207ENST00000537103 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
IFT88-207ENST00000537103 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
IFT88-207ENST00000537103 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
IFT88-207ENST00000537103 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms