RNA–Protein interactions for RNA: ENST00000536880.5

LDHC-204, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-204ENST00000536880 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
LDHC-204ENST00000536880 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
LDHC-204ENST00000536880 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
LDHC-204ENST00000536880 MRPL34Q9BQ48 92 aaKnown RBP3.43□□□□□ -1.86
LDHC-204ENST00000536880 INE1O15225 51 aa3.42□□□□□ -1.86
LDHC-204ENST00000536880 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
LDHC-204ENST00000536880 CRIPTQ9P021 101 aa3.4□□□□□ -1.87
LDHC-204ENST00000536880 R4GN34 69 aa3.4□□□□□ -1.87
LDHC-204ENST00000536880 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
LDHC-204ENST00000536880 NEBP20929 6669 aa3.35□□□□□ -1.87
LDHC-204ENST00000536880 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
LDHC-204ENST00000536880 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
LDHC-204ENST00000536880 H0YAA0 97 aa3.31□□□□□ -1.88
LDHC-204ENST00000536880 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
LDHC-204ENST00000536880 MT1BP07438 61 aa3.23□□□□□ -1.89
LDHC-204ENST00000536880 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
LDHC-204ENST00000536880 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
LDHC-204ENST00000536880 KMT2DO14686 5537 aa3.21□□□□□ -1.89
LDHC-204ENST00000536880 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
LDHC-204ENST00000536880 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
LDHC-204ENST00000536880 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
LDHC-204ENST00000536880 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
LDHC-204ENST00000536880 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
LDHC-204ENST00000536880 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
LDHC-204ENST00000536880 SPRR2EP22531 72 aa3.1□□□□□ -1.91
LDHC-204ENST00000536880 SPRR2BP35325 72 aa3.1□□□□□ -1.91
LDHC-204ENST00000536880 SPRR2AP35326 72 aa3.1□□□□□ -1.91
LDHC-204ENST00000536880 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
LDHC-204ENST00000536880 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
LDHC-204ENST00000536880 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
LDHC-204ENST00000536880 S4R3F8 94 aa3.06□□□□□ -1.92
LDHC-204ENST00000536880 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
LDHC-204ENST00000536880 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
LDHC-204ENST00000536880 SPRR2DP22532 72 aa3□□□□□ -1.93
LDHC-204ENST00000536880 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
LDHC-204ENST00000536880 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
LDHC-204ENST00000536880 MT1XP80297 61 aa2.97□□□□□ -1.93
LDHC-204ENST00000536880 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
LDHC-204ENST00000536880 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
LDHC-204ENST00000536880 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
LDHC-204ENST00000536880 M0QZ58 72 aa2.87□□□□□ -1.95
LDHC-204ENST00000536880 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
LDHC-204ENST00000536880 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
LDHC-204ENST00000536880 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
LDHC-204ENST00000536880 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
LDHC-204ENST00000536880 A0A0D9SG42 100 aa2.74□□□□□ -1.97
LDHC-204ENST00000536880 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
LDHC-204ENST00000536880 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
LDHC-204ENST00000536880 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
LDHC-204ENST00000536880 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
LDHC-204ENST00000536880 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
LDHC-204ENST00000536880 MT1EP04732 61 aa2.64□□□□□ -1.99
LDHC-204ENST00000536880 MT4P47944 62 aa2.64□□□□□ -1.99
LDHC-204ENST00000536880 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
LDHC-204ENST00000536880 MT1GP13640 62 aa2.57□□□□□ -2
LDHC-204ENST00000536880 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
LDHC-204ENST00000536880 KRTAP5-8O75690 187 aa2.55□□□□□ -2
LDHC-204ENST00000536880 MT1MQ8N339 61 aa2.53□□□□□ -2
LDHC-204ENST00000536880 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
LDHC-204ENST00000536880 TNP1P09430 55 aa2.51□□□□□ -2.01
LDHC-204ENST00000536880 MT1LQ93083 61 aa2.48□□□□□ -2.01
LDHC-204ENST00000536880 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
LDHC-204ENST00000536880 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
LDHC-204ENST00000536880 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
LDHC-204ENST00000536880 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
LDHC-204ENST00000536880 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
LDHC-204ENST00000536880 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
LDHC-204ENST00000536880 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
LDHC-204ENST00000536880 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
LDHC-204ENST00000536880 MT1AP04731 61 aa2.11□□□□□ -2.07
LDHC-204ENST00000536880 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
LDHC-204ENST00000536880 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
LDHC-204ENST00000536880 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
LDHC-204ENST00000536880 PRM1P04553 51 aa1.77□□□□□ -2.13
LDHC-204ENST00000536880 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
LDHC-204ENST00000536880 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
LDHC-204ENST00000536880 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 39.3 ms