RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
TNFRSF1A-208ENST00000536194 K7ERS5 55 aa4.11□□□□□ -1.75
TNFRSF1A-208ENST00000536194 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
TNFRSF1A-208ENST00000536194 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
TNFRSF1A-208ENST00000536194 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
TNFRSF1A-208ENST00000536194 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
TNFRSF1A-208ENST00000536194 MT1LQ93083 61 aa4.05□□□□□ -1.76
TNFRSF1A-208ENST00000536194 MT1GP13640 62 aa4.02□□□□□ -1.77
TNFRSF1A-208ENST00000536194 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
TNFRSF1A-208ENST00000536194 KRTAP12-3P60328 96 aa4□□□□□ -1.77
TNFRSF1A-208ENST00000536194 MT1MQ8N339 61 aa3.99□□□□□ -1.77
TNFRSF1A-208ENST00000536194 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
TNFRSF1A-208ENST00000536194 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
TNFRSF1A-208ENST00000536194 ROMO1P60602 79 aa3.92□□□□□ -1.78
TNFRSF1A-208ENST00000536194 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
TNFRSF1A-208ENST00000536194 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
TNFRSF1A-208ENST00000536194 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
TNFRSF1A-208ENST00000536194 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
TNFRSF1A-208ENST00000536194 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
TNFRSF1A-208ENST00000536194 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
TNFRSF1A-208ENST00000536194 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
TNFRSF1A-208ENST00000536194 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
TNFRSF1A-208ENST00000536194 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
TNFRSF1A-208ENST00000536194 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
TNFRSF1A-208ENST00000536194 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
TNFRSF1A-208ENST00000536194 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
TNFRSF1A-208ENST00000536194 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
TNFRSF1A-208ENST00000536194 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
TNFRSF1A-208ENST00000536194 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
TNFRSF1A-208ENST00000536194 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
TNFRSF1A-208ENST00000536194 MT4P47944 62 aa3.66□□□□□ -1.82
TNFRSF1A-208ENST00000536194 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
TNFRSF1A-208ENST00000536194 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
TNFRSF1A-208ENST00000536194 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
TNFRSF1A-208ENST00000536194 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
TNFRSF1A-208ENST00000536194 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
TNFRSF1A-208ENST00000536194 H3BS24 57 aa3.48□□□□□ -1.85
TNFRSF1A-208ENST00000536194 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
TNFRSF1A-208ENST00000536194 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
TNFRSF1A-208ENST00000536194 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
TNFRSF1A-208ENST00000536194 MT1AP04731 61 aa3.44□□□□□ -1.86
TNFRSF1A-208ENST00000536194 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
TNFRSF1A-208ENST00000536194 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
TNFRSF1A-208ENST00000536194 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
TNFRSF1A-208ENST00000536194 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TNFRSF1A-208ENST00000536194 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
TNFRSF1A-208ENST00000536194 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
TNFRSF1A-208ENST00000536194 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
TNFRSF1A-208ENST00000536194 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
TNFRSF1A-208ENST00000536194 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
TNFRSF1A-208ENST00000536194 MT3P25713 68 aa3.11□□□□□ -1.91
TNFRSF1A-208ENST00000536194 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
TNFRSF1A-208ENST00000536194 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
TNFRSF1A-208ENST00000536194 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
TNFRSF1A-208ENST00000536194 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
TNFRSF1A-208ENST00000536194 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
TNFRSF1A-208ENST00000536194 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
TNFRSF1A-208ENST00000536194 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
TNFRSF1A-208ENST00000536194 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
TNFRSF1A-208ENST00000536194 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
TNFRSF1A-208ENST00000536194 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
TNFRSF1A-208ENST00000536194 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
TNFRSF1A-208ENST00000536194 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
TNFRSF1A-208ENST00000536194 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
TNFRSF1A-208ENST00000536194 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
TNFRSF1A-208ENST00000536194 INE1O15225 51 aa2.56□□□□□ -2
TNFRSF1A-208ENST00000536194 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
TNFRSF1A-208ENST00000536194 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
TNFRSF1A-208ENST00000536194 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
TNFRSF1A-208ENST00000536194 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
TNFRSF1A-208ENST00000536194 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TNFRSF1A-208ENST00000536194 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
TNFRSF1A-208ENST00000536194 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
TNFRSF1A-208ENST00000536194 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
TNFRSF1A-208ENST00000536194 PRM1P04553 51 aa2.03□□□□□ -2.08
TNFRSF1A-208ENST00000536194 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
TNFRSF1A-208ENST00000536194 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
TNFRSF1A-208ENST00000536194 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms