RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
DDX55-204ENST00000536079 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
DDX55-204ENST00000536079 MT1LQ93083 61 aa6.4□□□□□ -1.38
DDX55-204ENST00000536079 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
DDX55-204ENST00000536079 MT1GP13640 62 aa6.36□□□□□ -1.39
DDX55-204ENST00000536079 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
DDX55-204ENST00000536079 MT1MQ8N339 61 aa6.31□□□□□ -1.4
DDX55-204ENST00000536079 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
DDX55-204ENST00000536079 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
DDX55-204ENST00000536079 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
DDX55-204ENST00000536079 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
DDX55-204ENST00000536079 ROMO1P60602 79 aa6.18□□□□□ -1.42
DDX55-204ENST00000536079 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
DDX55-204ENST00000536079 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
DDX55-204ENST00000536079 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
DDX55-204ENST00000536079 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
DDX55-204ENST00000536079 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
DDX55-204ENST00000536079 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
DDX55-204ENST00000536079 KRTAP5-4Q6L8H1 288 aa5.85□□□□□ -1.47
DDX55-204ENST00000536079 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
DDX55-204ENST00000536079 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
DDX55-204ENST00000536079 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
DDX55-204ENST00000536079 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
DDX55-204ENST00000536079 MT4P47944 62 aa5.8□□□□□ -1.48
DDX55-204ENST00000536079 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
DDX55-204ENST00000536079 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
DDX55-204ENST00000536079 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
DDX55-204ENST00000536079 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
DDX55-204ENST00000536079 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
DDX55-204ENST00000536079 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
DDX55-204ENST00000536079 GPR98Q8WXG9 6306 aa5.49□□□□□ -1.53
DDX55-204ENST00000536079 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
DDX55-204ENST00000536079 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
DDX55-204ENST00000536079 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
DDX55-204ENST00000536079 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
DDX55-204ENST00000536079 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
DDX55-204ENST00000536079 MT1AP04731 61 aa5.42□□□□□ -1.54
DDX55-204ENST00000536079 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
DDX55-204ENST00000536079 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
DDX55-204ENST00000536079 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
DDX55-204ENST00000536079 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
DDX55-204ENST00000536079 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
DDX55-204ENST00000536079 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
DDX55-204ENST00000536079 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
DDX55-204ENST00000536079 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
DDX55-204ENST00000536079 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
DDX55-204ENST00000536079 H3BS24 57 aa4.98□□□□□ -1.61
DDX55-204ENST00000536079 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
DDX55-204ENST00000536079 MT3P25713 68 aa4.92□□□□□ -1.62
DDX55-204ENST00000536079 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
DDX55-204ENST00000536079 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
DDX55-204ENST00000536079 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
DDX55-204ENST00000536079 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
DDX55-204ENST00000536079 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
DDX55-204ENST00000536079 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
DDX55-204ENST00000536079 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
DDX55-204ENST00000536079 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
DDX55-204ENST00000536079 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
DDX55-204ENST00000536079 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
DDX55-204ENST00000536079 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
DDX55-204ENST00000536079 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
DDX55-204ENST00000536079 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
DDX55-204ENST00000536079 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
DDX55-204ENST00000536079 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
DDX55-204ENST00000536079 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
DDX55-204ENST00000536079 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
DDX55-204ENST00000536079 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
DDX55-204ENST00000536079 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
DDX55-204ENST00000536079 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
DDX55-204ENST00000536079 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
DDX55-204ENST00000536079 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
DDX55-204ENST00000536079 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
DDX55-204ENST00000536079 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
DDX55-204ENST00000536079 PRM1P04553 51 aa3.22□□□□□ -1.89
DDX55-204ENST00000536079 INE1O15225 51 aa3.01□□□□□ -1.93
DDX55-204ENST00000536079 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
DDX55-204ENST00000536079 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
DDX55-204ENST00000536079 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms