RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 KRTAP19-3Q7Z4W3 81 aa8.14□□□□□ -1.11
VPS37C-202ENST00000535818 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
VPS37C-202ENST00000535818 LCE5AQ5TCM9 118 aa8.1□□□□□ -1.11
VPS37C-202ENST00000535818 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
VPS37C-202ENST00000535818 MT1GP13640 62 aa7.97□□□□□ -1.13
VPS37C-202ENST00000535818 PP632Q6XCG6 107 aa7.95□□□□□ -1.14
VPS37C-202ENST00000535818 MT1LQ93083 61 aa7.92□□□□□ -1.14
VPS37C-202ENST00000535818 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
VPS37C-202ENST00000535818 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
VPS37C-202ENST00000535818 ROMO1P60602 79 aa7.84□□□□□ -1.15
VPS37C-202ENST00000535818 MT1MQ8N339 61 aa7.83□□□□□ -1.16
VPS37C-202ENST00000535818 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
VPS37C-202ENST00000535818 KRTAP4-3Q9BYR4 195 aa7.63□□□□□ -1.19
VPS37C-202ENST00000535818 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
VPS37C-202ENST00000535818 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
VPS37C-202ENST00000535818 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
VPS37C-202ENST00000535818 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
VPS37C-202ENST00000535818 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
VPS37C-202ENST00000535818 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
VPS37C-202ENST00000535818 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
VPS37C-202ENST00000535818 MT4P47944 62 aa7.33□□□□□ -1.24
VPS37C-202ENST00000535818 KRTAP5-4Q6L8H1 288 aa7.29□□□□□ -1.24
VPS37C-202ENST00000535818 LCE3CQ5T5A8 94 aa7.24□□□□□ -1.25
VPS37C-202ENST00000535818 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
VPS37C-202ENST00000535818 HMCN1Q96RW7 5635 aa7.14□□□□□ -1.27
VPS37C-202ENST00000535818 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
VPS37C-202ENST00000535818 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
VPS37C-202ENST00000535818 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
VPS37C-202ENST00000535818 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
VPS37C-202ENST00000535818 KRTAP12-4P60329 112 aa6.94□□□□□ -1.3
VPS37C-202ENST00000535818 PRO0628Q9UI54 55 aa6.92□□□□□ -1.3
VPS37C-202ENST00000535818 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.3
VPS37C-202ENST00000535818 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
VPS37C-202ENST00000535818 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
VPS37C-202ENST00000535818 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
VPS37C-202ENST00000535818 KRTAP9-6A8MVA2 160 aa6.77□□□□□ -1.33
VPS37C-202ENST00000535818 MT1AP04731 61 aa6.75□□□□□ -1.33
VPS37C-202ENST00000535818 KRTAP6-1Q3LI64 71 aa6.69□□□□□ -1.34
VPS37C-202ENST00000535818 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
VPS37C-202ENST00000535818 KRTAP5-10Q6L8G5 202 aa6.67□□□□□ -1.34
VPS37C-202ENST00000535818 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
VPS37C-202ENST00000535818 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
VPS37C-202ENST00000535818 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
VPS37C-202ENST00000535818 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
VPS37C-202ENST00000535818 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
VPS37C-202ENST00000535818 KRTAP6-2Q3LI66 62 aa6.35□□□□□ -1.39
VPS37C-202ENST00000535818 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
VPS37C-202ENST00000535818 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
VPS37C-202ENST00000535818 MT3P25713 68 aa6.18□□□□□ -1.42
VPS37C-202ENST00000535818 KRTAP5-8O75690 187 aa6□□□□□ -1.45
VPS37C-202ENST00000535818 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
VPS37C-202ENST00000535818 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
VPS37C-202ENST00000535818 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
VPS37C-202ENST00000535818 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
VPS37C-202ENST00000535818 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
VPS37C-202ENST00000535818 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
VPS37C-202ENST00000535818 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
VPS37C-202ENST00000535818 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
VPS37C-202ENST00000535818 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
VPS37C-202ENST00000535818 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
VPS37C-202ENST00000535818 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
VPS37C-202ENST00000535818 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
VPS37C-202ENST00000535818 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
VPS37C-202ENST00000535818 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
VPS37C-202ENST00000535818 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
VPS37C-202ENST00000535818 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
VPS37C-202ENST00000535818 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
VPS37C-202ENST00000535818 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
VPS37C-202ENST00000535818 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
VPS37C-202ENST00000535818 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
VPS37C-202ENST00000535818 INE1O15225 51 aa4.08□□□□□ -1.76
VPS37C-202ENST00000535818 PHGR1C9JFL3 82 aa4.02□□□□□ -1.77
VPS37C-202ENST00000535818 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
VPS37C-202ENST00000535818 PRM1P04553 51 aa3.99□□□□□ -1.77
VPS37C-202ENST00000535818 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
VPS37C-202ENST00000535818 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
VPS37C-202ENST00000535818 H3BS24 57 aa2.66□□□□□ -1.98
VPS37C-202ENST00000535818 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 153.3 ms