RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
CAPRIN1-217ENST00000534825 TNP1P09430 55 aa6.48□□□□□ -1.37
CAPRIN1-217ENST00000534825 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-217ENST00000534825 MT1GP13640 62 aa6.45□□□□□ -1.38
CAPRIN1-217ENST00000534825 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
CAPRIN1-217ENST00000534825 H3BS24 57 aa6.4□□□□□ -1.38
CAPRIN1-217ENST00000534825 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
CAPRIN1-217ENST00000534825 MT1LQ93083 61 aa6.37□□□□□ -1.39
CAPRIN1-217ENST00000534825 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
CAPRIN1-217ENST00000534825 MT1MQ8N339 61 aa6.33□□□□□ -1.4
CAPRIN1-217ENST00000534825 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
CAPRIN1-217ENST00000534825 ROMO1P60602 79 aa6.27□□□□□ -1.41
CAPRIN1-217ENST00000534825 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
CAPRIN1-217ENST00000534825 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
CAPRIN1-217ENST00000534825 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
CAPRIN1-217ENST00000534825 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
CAPRIN1-217ENST00000534825 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
CAPRIN1-217ENST00000534825 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
CAPRIN1-217ENST00000534825 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
CAPRIN1-217ENST00000534825 KRTAP5-4Q6L8H1 288 aa6.04□□□□□ -1.44
CAPRIN1-217ENST00000534825 MT4P47944 62 aa6.01□□□□□ -1.45
CAPRIN1-217ENST00000534825 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
CAPRIN1-217ENST00000534825 PMAIP1Q13794 54 aa5.99□□□□□ -1.45
CAPRIN1-217ENST00000534825 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
CAPRIN1-217ENST00000534825 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
CAPRIN1-217ENST00000534825 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
CAPRIN1-217ENST00000534825 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
CAPRIN1-217ENST00000534825 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
CAPRIN1-217ENST00000534825 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
CAPRIN1-217ENST00000534825 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
CAPRIN1-217ENST00000534825 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
CAPRIN1-217ENST00000534825 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
CAPRIN1-217ENST00000534825 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
CAPRIN1-217ENST00000534825 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
CAPRIN1-217ENST00000534825 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
CAPRIN1-217ENST00000534825 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
CAPRIN1-217ENST00000534825 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.51
CAPRIN1-217ENST00000534825 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
CAPRIN1-217ENST00000534825 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
CAPRIN1-217ENST00000534825 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
CAPRIN1-217ENST00000534825 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
CAPRIN1-217ENST00000534825 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
CAPRIN1-217ENST00000534825 MT1AP04731 61 aa5.41□□□□□ -1.54
CAPRIN1-217ENST00000534825 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
CAPRIN1-217ENST00000534825 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
CAPRIN1-217ENST00000534825 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
CAPRIN1-217ENST00000534825 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
CAPRIN1-217ENST00000534825 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
CAPRIN1-217ENST00000534825 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
CAPRIN1-217ENST00000534825 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
CAPRIN1-217ENST00000534825 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
CAPRIN1-217ENST00000534825 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
CAPRIN1-217ENST00000534825 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
CAPRIN1-217ENST00000534825 MT3P25713 68 aa4.95□□□□□ -1.62
CAPRIN1-217ENST00000534825 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
CAPRIN1-217ENST00000534825 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
CAPRIN1-217ENST00000534825 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
CAPRIN1-217ENST00000534825 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
CAPRIN1-217ENST00000534825 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CAPRIN1-217ENST00000534825 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CAPRIN1-217ENST00000534825 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CAPRIN1-217ENST00000534825 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
CAPRIN1-217ENST00000534825 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
CAPRIN1-217ENST00000534825 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
CAPRIN1-217ENST00000534825 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
CAPRIN1-217ENST00000534825 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CAPRIN1-217ENST00000534825 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
CAPRIN1-217ENST00000534825 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
CAPRIN1-217ENST00000534825 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CAPRIN1-217ENST00000534825 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
CAPRIN1-217ENST00000534825 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CAPRIN1-217ENST00000534825 INE1O15225 51 aa3.48□□□□□ -1.85
CAPRIN1-217ENST00000534825 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
CAPRIN1-217ENST00000534825 PRM1P04553 51 aa3.25□□□□□ -1.89
CAPRIN1-217ENST00000534825 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
CAPRIN1-217ENST00000534825 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CAPRIN1-217ENST00000534825 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CAPRIN1-217ENST00000534825 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 126.6 ms