RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
VPS11-205ENST00000534551 MT1LQ93083 61 aa5.02□□□□□ -1.61
VPS11-205ENST00000534551 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
VPS11-205ENST00000534551 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
VPS11-205ENST00000534551 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
VPS11-205ENST00000534551 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
VPS11-205ENST00000534551 MT1MQ8N339 61 aa4.96□□□□□ -1.62
VPS11-205ENST00000534551 MT1GP13640 62 aa4.95□□□□□ -1.62
VPS11-205ENST00000534551 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
VPS11-205ENST00000534551 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
VPS11-205ENST00000534551 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
VPS11-205ENST00000534551 ROMO1P60602 79 aa4.88□□□□□ -1.63
VPS11-205ENST00000534551 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
VPS11-205ENST00000534551 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
VPS11-205ENST00000534551 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
VPS11-205ENST00000534551 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
VPS11-205ENST00000534551 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
VPS11-205ENST00000534551 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
VPS11-205ENST00000534551 MT4P47944 62 aa4.58□□□□□ -1.68
VPS11-205ENST00000534551 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
VPS11-205ENST00000534551 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
VPS11-205ENST00000534551 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
VPS11-205ENST00000534551 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
VPS11-205ENST00000534551 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
VPS11-205ENST00000534551 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
VPS11-205ENST00000534551 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
VPS11-205ENST00000534551 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
VPS11-205ENST00000534551 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
VPS11-205ENST00000534551 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
VPS11-205ENST00000534551 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
VPS11-205ENST00000534551 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
VPS11-205ENST00000534551 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
VPS11-205ENST00000534551 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
VPS11-205ENST00000534551 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
VPS11-205ENST00000534551 MT1AP04731 61 aa4.26□□□□□ -1.73
VPS11-205ENST00000534551 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
VPS11-205ENST00000534551 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
VPS11-205ENST00000534551 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
VPS11-205ENST00000534551 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
VPS11-205ENST00000534551 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
VPS11-205ENST00000534551 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
VPS11-205ENST00000534551 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
VPS11-205ENST00000534551 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
VPS11-205ENST00000534551 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
VPS11-205ENST00000534551 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
VPS11-205ENST00000534551 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
VPS11-205ENST00000534551 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
VPS11-205ENST00000534551 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
VPS11-205ENST00000534551 MT3P25713 68 aa3.83□□□□□ -1.8
VPS11-205ENST00000534551 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
VPS11-205ENST00000534551 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
VPS11-205ENST00000534551 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
VPS11-205ENST00000534551 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
VPS11-205ENST00000534551 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
VPS11-205ENST00000534551 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
VPS11-205ENST00000534551 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
VPS11-205ENST00000534551 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
VPS11-205ENST00000534551 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
VPS11-205ENST00000534551 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
VPS11-205ENST00000534551 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
VPS11-205ENST00000534551 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
VPS11-205ENST00000534551 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
VPS11-205ENST00000534551 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
VPS11-205ENST00000534551 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
VPS11-205ENST00000534551 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
VPS11-205ENST00000534551 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
VPS11-205ENST00000534551 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
VPS11-205ENST00000534551 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
VPS11-205ENST00000534551 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
VPS11-205ENST00000534551 H3BS24 57 aa2.65□□□□□ -1.99
VPS11-205ENST00000534551 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
VPS11-205ENST00000534551 PRM1P04553 51 aa2.57□□□□□ -2
VPS11-205ENST00000534551 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
VPS11-205ENST00000534551 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
VPS11-205ENST00000534551 INE1O15225 51 aa2.39□□□□□ -2.03
VPS11-205ENST00000534551 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
VPS11-205ENST00000534551 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
VPS11-205ENST00000534551 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 88.9 ms