RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
CTSB-230ENST00000534149 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
CTSB-230ENST00000534149 SERP1Q9Y6X1 66 aa5.13□□□□□ -1.59
CTSB-230ENST00000534149 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
CTSB-230ENST00000534149 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
CTSB-230ENST00000534149 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
CTSB-230ENST00000534149 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
CTSB-230ENST00000534149 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
CTSB-230ENST00000534149 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
CTSB-230ENST00000534149 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
CTSB-230ENST00000534149 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
CTSB-230ENST00000534149 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
CTSB-230ENST00000534149 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
CTSB-230ENST00000534149 A0A1B0GU33 70 aa4.94□□□□□ -1.62
CTSB-230ENST00000534149 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
CTSB-230ENST00000534149 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
CTSB-230ENST00000534149 COA5Q86WW8 74 aa4.92□□□□□ -1.62
CTSB-230ENST00000534149 TNP1P09430 55 aa4.9□□□□□ -1.63
CTSB-230ENST00000534149 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
CTSB-230ENST00000534149 Q1T7F1 81 aa4.88□□□□□ -1.63
CTSB-230ENST00000534149 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
CTSB-230ENST00000534149 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
CTSB-230ENST00000534149 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
CTSB-230ENST00000534149 A8MU10 97 aa4.81□□□□□ -1.64
CTSB-230ENST00000534149 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CTSB-230ENST00000534149 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
CTSB-230ENST00000534149 H3BS24 57 aa4.75□□□□□ -1.65
CTSB-230ENST00000534149 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
CTSB-230ENST00000534149 PSPHP1O15172 72 aa4.71□□□□□ -1.66
CTSB-230ENST00000534149 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
CTSB-230ENST00000534149 A0A1B0GU69 56 aa4.66□□□□□ -1.66
CTSB-230ENST00000534149 AHNAKQ09666 5890 aaKnown RBP4.65□□□□□ -1.67
CTSB-230ENST00000534149 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
CTSB-230ENST00000534149 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
CTSB-230ENST00000534149 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
CTSB-230ENST00000534149 A6NED7 52 aa4.59□□□□□ -1.67
CTSB-230ENST00000534149 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
CTSB-230ENST00000534149 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
CTSB-230ENST00000534149 UQCR11O14957 56 aa4.53□□□□□ -1.68
CTSB-230ENST00000534149 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
CTSB-230ENST00000534149 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
CTSB-230ENST00000534149 MT1AP04731 61 aa4.47□□□□□ -1.69
CTSB-230ENST00000534149 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CTSB-230ENST00000534149 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
CTSB-230ENST00000534149 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
CTSB-230ENST00000534149 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
CTSB-230ENST00000534149 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
CTSB-230ENST00000534149 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
CTSB-230ENST00000534149 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
CTSB-230ENST00000534149 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
CTSB-230ENST00000534149 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
CTSB-230ENST00000534149 K7ERS5 55 aa4.27□□□□□ -1.73
CTSB-230ENST00000534149 ROMO1P60602 79 aa4.22□□□□□ -1.73
CTSB-230ENST00000534149 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
CTSB-230ENST00000534149 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
CTSB-230ENST00000534149 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
CTSB-230ENST00000534149 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
CTSB-230ENST00000534149 MT3P25713 68 aa4.1□□□□□ -1.75
CTSB-230ENST00000534149 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
CTSB-230ENST00000534149 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
CTSB-230ENST00000534149 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
CTSB-230ENST00000534149 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
CTSB-230ENST00000534149 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CTSB-230ENST00000534149 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
CTSB-230ENST00000534149 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
CTSB-230ENST00000534149 INE1O15225 51 aa3.43□□□□□ -1.86
CTSB-230ENST00000534149 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CTSB-230ENST00000534149 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CTSB-230ENST00000534149 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
CTSB-230ENST00000534149 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
CTSB-230ENST00000534149 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
CTSB-230ENST00000534149 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
CTSB-230ENST00000534149 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CTSB-230ENST00000534149 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CTSB-230ENST00000534149 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
CTSB-230ENST00000534149 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CTSB-230ENST00000534149 PRM1P04553 51 aa2.13□□□□□ -2.07
CTSB-230ENST00000534149 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 7.3 ms