RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
TTC39A-218ENST00000534098 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
TTC39A-218ENST00000534098 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
TTC39A-218ENST00000534098 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
TTC39A-218ENST00000534098 MT1GP13640 62 aa4.25□□□□□ -1.73
TTC39A-218ENST00000534098 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
TTC39A-218ENST00000534098 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
TTC39A-218ENST00000534098 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
TTC39A-218ENST00000534098 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
TTC39A-218ENST00000534098 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
TTC39A-218ENST00000534098 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
TTC39A-218ENST00000534098 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
TTC39A-218ENST00000534098 MT1MQ8N339 61 aa4.18□□□□□ -1.74
TTC39A-218ENST00000534098 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
TTC39A-218ENST00000534098 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
TTC39A-218ENST00000534098 A0A0D9SG42 100 aa4.14□□□□□ -1.75
TTC39A-218ENST00000534098 MT1LQ93083 61 aa4.12□□□□□ -1.75
TTC39A-218ENST00000534098 A0A1B0GU33 70 aa4.11□□□□□ -1.75
TTC39A-218ENST00000534098 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
TTC39A-218ENST00000534098 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
TTC39A-218ENST00000534098 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
TTC39A-218ENST00000534098 MT3P25713 68 aa4.04□□□□□ -1.76
TTC39A-218ENST00000534098 COA5Q86WW8 74 aa4.02□□□□□ -1.77
TTC39A-218ENST00000534098 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
TTC39A-218ENST00000534098 SPATA8Q6RVD6 105 aa4.01□□□□□ -1.77
TTC39A-218ENST00000534098 SERP1Q9Y6X1 66 aa3.99□□□□□ -1.77
TTC39A-218ENST00000534098 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
TTC39A-218ENST00000534098 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
TTC39A-218ENST00000534098 TMEM258P61165 79 aa3.97□□□□□ -1.77
TTC39A-218ENST00000534098 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
TTC39A-218ENST00000534098 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
TTC39A-218ENST00000534098 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
TTC39A-218ENST00000534098 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
TTC39A-218ENST00000534098 ROMO1P60602 79 aa3.92□□□□□ -1.78
TTC39A-218ENST00000534098 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
TTC39A-218ENST00000534098 H7BZZ5 65 aa3.85□□□□□ -1.79
TTC39A-218ENST00000534098 COX7CP15954 63 aa3.85□□□□□ -1.79
TTC39A-218ENST00000534098 A8MU10 97 aa3.84□□□□□ -1.79
TTC39A-218ENST00000534098 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
TTC39A-218ENST00000534098 A0A1B0GU69 56 aa3.81□□□□□ -1.8
TTC39A-218ENST00000534098 TNP1P09430 55 aa3.81□□□□□ -1.8
TTC39A-218ENST00000534098 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
TTC39A-218ENST00000534098 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
TTC39A-218ENST00000534098 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
TTC39A-218ENST00000534098 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
TTC39A-218ENST00000534098 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
TTC39A-218ENST00000534098 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
TTC39A-218ENST00000534098 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
TTC39A-218ENST00000534098 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
TTC39A-218ENST00000534098 Q1T7F1 81 aa3.62□□□□□ -1.83
TTC39A-218ENST00000534098 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
TTC39A-218ENST00000534098 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
TTC39A-218ENST00000534098 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
TTC39A-218ENST00000534098 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
TTC39A-218ENST00000534098 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
TTC39A-218ENST00000534098 UQCR11O14957 56 aa3.53□□□□□ -1.84
TTC39A-218ENST00000534098 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
TTC39A-218ENST00000534098 MT1AP04731 61 aa3.5□□□□□ -1.85
TTC39A-218ENST00000534098 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TTC39A-218ENST00000534098 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
TTC39A-218ENST00000534098 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
TTC39A-218ENST00000534098 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
TTC39A-218ENST00000534098 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
TTC39A-218ENST00000534098 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
TTC39A-218ENST00000534098 INE1O15225 51 aa3.31□□□□□ -1.88
TTC39A-218ENST00000534098 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
TTC39A-218ENST00000534098 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
TTC39A-218ENST00000534098 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
TTC39A-218ENST00000534098 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
TTC39A-218ENST00000534098 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
TTC39A-218ENST00000534098 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
TTC39A-218ENST00000534098 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
TTC39A-218ENST00000534098 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TTC39A-218ENST00000534098 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
TTC39A-218ENST00000534098 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
TTC39A-218ENST00000534098 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
TTC39A-218ENST00000534098 PRM1P04553 51 aa1.61□□□□□ -2.15
TTC39A-218ENST00000534098 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms