RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
LDLRAD3-206ENST00000534091 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
LDLRAD3-206ENST00000534091 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
LDLRAD3-206ENST00000534091 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
LDLRAD3-206ENST00000534091 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
LDLRAD3-206ENST00000534091 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
LDLRAD3-206ENST00000534091 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
LDLRAD3-206ENST00000534091 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
LDLRAD3-206ENST00000534091 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
LDLRAD3-206ENST00000534091 KMT2DO14686 5537 aa3.95□□□□□ -1.78
LDLRAD3-206ENST00000534091 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
LDLRAD3-206ENST00000534091 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
LDLRAD3-206ENST00000534091 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
LDLRAD3-206ENST00000534091 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
LDLRAD3-206ENST00000534091 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
LDLRAD3-206ENST00000534091 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
LDLRAD3-206ENST00000534091 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
LDLRAD3-206ENST00000534091 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
LDLRAD3-206ENST00000534091 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
LDLRAD3-206ENST00000534091 SPRR2EP22531 72 aa3.84□□□□□ -1.79
LDLRAD3-206ENST00000534091 SPRR2BP35325 72 aa3.84□□□□□ -1.79
LDLRAD3-206ENST00000534091 SPRR2AP35326 72 aa3.84□□□□□ -1.79
LDLRAD3-206ENST00000534091 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
LDLRAD3-206ENST00000534091 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
LDLRAD3-206ENST00000534091 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
LDLRAD3-206ENST00000534091 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
LDLRAD3-206ENST00000534091 SPRR2DP22532 72 aa3.72□□□□□ -1.81
LDLRAD3-206ENST00000534091 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
LDLRAD3-206ENST00000534091 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
LDLRAD3-206ENST00000534091 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
LDLRAD3-206ENST00000534091 MT1EP04732 61 aa3.66□□□□□ -1.82
LDLRAD3-206ENST00000534091 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
LDLRAD3-206ENST00000534091 MT1LQ93083 61 aa3.58□□□□□ -1.84
LDLRAD3-206ENST00000534091 MT1GP13640 62 aa3.55□□□□□ -1.84
LDLRAD3-206ENST00000534091 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
LDLRAD3-206ENST00000534091 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
LDLRAD3-206ENST00000534091 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
LDLRAD3-206ENST00000534091 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
LDLRAD3-206ENST00000534091 MT1MQ8N339 61 aa3.44□□□□□ -1.86
LDLRAD3-206ENST00000534091 INE1O15225 51 aa3.42□□□□□ -1.86
LDLRAD3-206ENST00000534091 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
LDLRAD3-206ENST00000534091 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
LDLRAD3-206ENST00000534091 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
LDLRAD3-206ENST00000534091 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
LDLRAD3-206ENST00000534091 MT3P25713 68 aa3.29□□□□□ -1.88
LDLRAD3-206ENST00000534091 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
LDLRAD3-206ENST00000534091 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
LDLRAD3-206ENST00000534091 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
LDLRAD3-206ENST00000534091 MT4P47944 62 aa3.2□□□□□ -1.9
LDLRAD3-206ENST00000534091 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
LDLRAD3-206ENST00000534091 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
LDLRAD3-206ENST00000534091 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
LDLRAD3-206ENST00000534091 MT1AP04731 61 aa3.07□□□□□ -1.92
LDLRAD3-206ENST00000534091 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
LDLRAD3-206ENST00000534091 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
LDLRAD3-206ENST00000534091 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
LDLRAD3-206ENST00000534091 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
LDLRAD3-206ENST00000534091 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
LDLRAD3-206ENST00000534091 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
LDLRAD3-206ENST00000534091 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
LDLRAD3-206ENST00000534091 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
LDLRAD3-206ENST00000534091 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
LDLRAD3-206ENST00000534091 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
LDLRAD3-206ENST00000534091 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
LDLRAD3-206ENST00000534091 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
LDLRAD3-206ENST00000534091 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
LDLRAD3-206ENST00000534091 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
LDLRAD3-206ENST00000534091 LCE1EQ5T753 118 aa2.55□□□□□ -2
LDLRAD3-206ENST00000534091 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
LDLRAD3-206ENST00000534091 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
LDLRAD3-206ENST00000534091 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
LDLRAD3-206ENST00000534091 PRM1P04553 51 aa2.19□□□□□ -2.06
LDLRAD3-206ENST00000534091 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
LDLRAD3-206ENST00000534091 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
LDLRAD3-206ENST00000534091 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
LDLRAD3-206ENST00000534091 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
LDLRAD3-206ENST00000534091 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
LDLRAD3-206ENST00000534091 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 45.5 ms