RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
CTTN-215ENST00000533931 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
CTTN-215ENST00000533931 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
CTTN-215ENST00000533931 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
CTTN-215ENST00000533931 MT1GP13640 62 aa5.58□□□□□ -1.52
CTTN-215ENST00000533931 SPRR2DP22532 72 aa5.58□□□□□ -1.52
CTTN-215ENST00000533931 MT1LQ93083 61 aa5.58□□□□□ -1.52
CTTN-215ENST00000533931 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
CTTN-215ENST00000533931 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
CTTN-215ENST00000533931 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
CTTN-215ENST00000533931 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CTTN-215ENST00000533931 MT1MQ8N339 61 aa5.46□□□□□ -1.54
CTTN-215ENST00000533931 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
CTTN-215ENST00000533931 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
CTTN-215ENST00000533931 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
CTTN-215ENST00000533931 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
CTTN-215ENST00000533931 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
CTTN-215ENST00000533931 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
CTTN-215ENST00000533931 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
CTTN-215ENST00000533931 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
CTTN-215ENST00000533931 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
CTTN-215ENST00000533931 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
CTTN-215ENST00000533931 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
CTTN-215ENST00000533931 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
CTTN-215ENST00000533931 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
CTTN-215ENST00000533931 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
CTTN-215ENST00000533931 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CTTN-215ENST00000533931 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
CTTN-215ENST00000533931 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
CTTN-215ENST00000533931 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
CTTN-215ENST00000533931 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
CTTN-215ENST00000533931 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
CTTN-215ENST00000533931 MT4P47944 62 aa4.8□□□□□ -1.64
CTTN-215ENST00000533931 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CTTN-215ENST00000533931 MT1AP04731 61 aa4.77□□□□□ -1.65
CTTN-215ENST00000533931 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
CTTN-215ENST00000533931 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
CTTN-215ENST00000533931 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
CTTN-215ENST00000533931 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
CTTN-215ENST00000533931 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
CTTN-215ENST00000533931 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
CTTN-215ENST00000533931 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
CTTN-215ENST00000533931 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
CTTN-215ENST00000533931 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
CTTN-215ENST00000533931 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
CTTN-215ENST00000533931 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
CTTN-215ENST00000533931 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
CTTN-215ENST00000533931 MT3P25713 68 aa4.35□□□□□ -1.71
CTTN-215ENST00000533931 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
CTTN-215ENST00000533931 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
CTTN-215ENST00000533931 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
CTTN-215ENST00000533931 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
CTTN-215ENST00000533931 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
CTTN-215ENST00000533931 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
CTTN-215ENST00000533931 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
CTTN-215ENST00000533931 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CTTN-215ENST00000533931 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
CTTN-215ENST00000533931 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
CTTN-215ENST00000533931 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
CTTN-215ENST00000533931 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CTTN-215ENST00000533931 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
CTTN-215ENST00000533931 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
CTTN-215ENST00000533931 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CTTN-215ENST00000533931 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
CTTN-215ENST00000533931 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CTTN-215ENST00000533931 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
CTTN-215ENST00000533931 INE1O15225 51 aa3.29□□□□□ -1.88
CTTN-215ENST00000533931 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
CTTN-215ENST00000533931 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CTTN-215ENST00000533931 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
CTTN-215ENST00000533931 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
CTTN-215ENST00000533931 PRM1P04553 51 aa2.98□□□□□ -1.93
CTTN-215ENST00000533931 H3BS24 57 aa2.92□□□□□ -1.94
CTTN-215ENST00000533931 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CTTN-215ENST00000533931 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CTTN-215ENST00000533931 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
CTTN-215ENST00000533931 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CTTN-215ENST00000533931 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 178.9 ms