RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 KRTAP19-7Q3SYF9 63 aa8.14□□□□□ -1.11
VPS51-212ENST00000533656 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
VPS51-212ENST00000533656 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
VPS51-212ENST00000533656 MT1EP04732 61 aa8.06□□□□□ -1.12
VPS51-212ENST00000533656 LCE3BQ5TA77 95 aa8□□□□□ -1.13
VPS51-212ENST00000533656 KRTAP12-3P60328 96 aa7.9□□□□□ -1.14
VPS51-212ENST00000533656 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
VPS51-212ENST00000533656 KRTAP19-3Q7Z4W3 81 aa7.89□□□□□ -1.15
VPS51-212ENST00000533656 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
VPS51-212ENST00000533656 MT1LQ93083 61 aa7.79□□□□□ -1.16
VPS51-212ENST00000533656 MT1GP13640 62 aa7.78□□□□□ -1.16
VPS51-212ENST00000533656 DSTQ03001 7570 aaKnown RBP7.77□□□□□ -1.17
VPS51-212ENST00000533656 PMAIP1Q13794 54 aa7.74□□□□□ -1.17
VPS51-212ENST00000533656 GPR98Q8WXG9 6306 aa7.7□□□□□ -1.18
VPS51-212ENST00000533656 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
VPS51-212ENST00000533656 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
VPS51-212ENST00000533656 MT1MQ8N339 61 aa7.62□□□□□ -1.19
VPS51-212ENST00000533656 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
VPS51-212ENST00000533656 KRTAP4-9Q9BYQ8 210 aa7.55□□□□□ -1.2
VPS51-212ENST00000533656 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
VPS51-212ENST00000533656 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
VPS51-212ENST00000533656 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
VPS51-212ENST00000533656 KRTAP4-3Q9BYR4 195 aa7.34□□□□□ -1.23
VPS51-212ENST00000533656 LCE3CQ5T5A8 94 aa7.32□□□□□ -1.24
VPS51-212ENST00000533656 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
VPS51-212ENST00000533656 MT4P47944 62 aa7.22□□□□□ -1.25
VPS51-212ENST00000533656 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
VPS51-212ENST00000533656 AHNAK2Q8IVF2 5795 aa7.22□□□□□ -1.25
VPS51-212ENST00000533656 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
VPS51-212ENST00000533656 KRTAP5-4Q6L8H1 288 aa7.07□□□□□ -1.28
VPS51-212ENST00000533656 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
VPS51-212ENST00000533656 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
VPS51-212ENST00000533656 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
VPS51-212ENST00000533656 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
VPS51-212ENST00000533656 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
VPS51-212ENST00000533656 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
VPS51-212ENST00000533656 KRTAP20-2Q3LI61 65 aa6.7□□□□□ -1.34
VPS51-212ENST00000533656 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
VPS51-212ENST00000533656 MT1AP04731 61 aa6.66□□□□□ -1.34
VPS51-212ENST00000533656 KRTAP12-4P60329 112 aa6.66□□□□□ -1.34
VPS51-212ENST00000533656 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
VPS51-212ENST00000533656 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
VPS51-212ENST00000533656 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
VPS51-212ENST00000533656 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
VPS51-212ENST00000533656 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
VPS51-212ENST00000533656 KRTAP5-2Q701N4 177 aa6.2□□□□□ -1.42
VPS51-212ENST00000533656 LUZP6Q538Z0 58 aa6.15□□□□□ -1.42
VPS51-212ENST00000533656 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
VPS51-212ENST00000533656 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
VPS51-212ENST00000533656 MT3P25713 68 aa6.08□□□□□ -1.44
VPS51-212ENST00000533656 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
VPS51-212ENST00000533656 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
VPS51-212ENST00000533656 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
VPS51-212ENST00000533656 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
VPS51-212ENST00000533656 OBSCNQ5VST9 7968 aa5.9□□□□□ -1.46
VPS51-212ENST00000533656 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
VPS51-212ENST00000533656 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
VPS51-212ENST00000533656 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
VPS51-212ENST00000533656 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
VPS51-212ENST00000533656 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
VPS51-212ENST00000533656 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
VPS51-212ENST00000533656 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
VPS51-212ENST00000533656 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
VPS51-212ENST00000533656 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
VPS51-212ENST00000533656 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
VPS51-212ENST00000533656 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
VPS51-212ENST00000533656 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
VPS51-212ENST00000533656 INE1O15225 51 aa4.55□□□□□ -1.68
VPS51-212ENST00000533656 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
VPS51-212ENST00000533656 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
VPS51-212ENST00000533656 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
VPS51-212ENST00000533656 PRM1P04553 51 aa4.19□□□□□ -1.74
VPS51-212ENST00000533656 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
VPS51-212ENST00000533656 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
VPS51-212ENST00000533656 H3BS24 57 aa3.79□□□□□ -1.8
VPS51-212ENST00000533656 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
VPS51-212ENST00000533656 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
VPS51-212ENST00000533656 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 104.1 ms