RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
SF3B2-213ENST00000533421 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SF3B2-213ENST00000533421 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SF3B2-213ENST00000533421 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
SF3B2-213ENST00000533421 MT1GP13640 62 aa4.44□□□□□ -1.7
SF3B2-213ENST00000533421 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
SF3B2-213ENST00000533421 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
SF3B2-213ENST00000533421 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
SF3B2-213ENST00000533421 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
SF3B2-213ENST00000533421 MT1LQ93083 61 aa4.33□□□□□ -1.72
SF3B2-213ENST00000533421 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
SF3B2-213ENST00000533421 ROMO1P60602 79 aa4.31□□□□□ -1.72
SF3B2-213ENST00000533421 MT1MQ8N339 61 aa4.31□□□□□ -1.72
SF3B2-213ENST00000533421 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
SF3B2-213ENST00000533421 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
SF3B2-213ENST00000533421 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
SF3B2-213ENST00000533421 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
SF3B2-213ENST00000533421 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
SF3B2-213ENST00000533421 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
SF3B2-213ENST00000533421 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
SF3B2-213ENST00000533421 MT4P47944 62 aa4.16□□□□□ -1.74
SF3B2-213ENST00000533421 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
SF3B2-213ENST00000533421 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
SF3B2-213ENST00000533421 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
SF3B2-213ENST00000533421 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
SF3B2-213ENST00000533421 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
SF3B2-213ENST00000533421 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
SF3B2-213ENST00000533421 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
SF3B2-213ENST00000533421 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
SF3B2-213ENST00000533421 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SF3B2-213ENST00000533421 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SF3B2-213ENST00000533421 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
SF3B2-213ENST00000533421 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SF3B2-213ENST00000533421 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
SF3B2-213ENST00000533421 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
SF3B2-213ENST00000533421 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SF3B2-213ENST00000533421 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
SF3B2-213ENST00000533421 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
SF3B2-213ENST00000533421 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
SF3B2-213ENST00000533421 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
SF3B2-213ENST00000533421 MT1AP04731 61 aa3.71□□□□□ -1.82
SF3B2-213ENST00000533421 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
SF3B2-213ENST00000533421 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
SF3B2-213ENST00000533421 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
SF3B2-213ENST00000533421 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
SF3B2-213ENST00000533421 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
SF3B2-213ENST00000533421 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SF3B2-213ENST00000533421 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SF3B2-213ENST00000533421 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
SF3B2-213ENST00000533421 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
SF3B2-213ENST00000533421 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SF3B2-213ENST00000533421 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
SF3B2-213ENST00000533421 MT3P25713 68 aa3.43□□□□□ -1.86
SF3B2-213ENST00000533421 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
SF3B2-213ENST00000533421 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
SF3B2-213ENST00000533421 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
SF3B2-213ENST00000533421 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SF3B2-213ENST00000533421 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
SF3B2-213ENST00000533421 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SF3B2-213ENST00000533421 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SF3B2-213ENST00000533421 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SF3B2-213ENST00000533421 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
SF3B2-213ENST00000533421 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
SF3B2-213ENST00000533421 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
SF3B2-213ENST00000533421 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
SF3B2-213ENST00000533421 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SF3B2-213ENST00000533421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
SF3B2-213ENST00000533421 LCE1FQ5T754 118 aa2.58□□□□□ -2
SF3B2-213ENST00000533421 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
SF3B2-213ENST00000533421 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SF3B2-213ENST00000533421 PRM1P04553 51 aa2.27□□□□□ -2.05
SF3B2-213ENST00000533421 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SF3B2-213ENST00000533421 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
SF3B2-213ENST00000533421 INE1O15225 51 aa2.16□□□□□ -2.06
SF3B2-213ENST00000533421 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SF3B2-213ENST00000533421 H3BS24 57 aa1.89□□□□□ -2.11
SF3B2-213ENST00000533421 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SF3B2-213ENST00000533421 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 85.8 ms