RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
NUP98-220ENST00000533346 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
NUP98-220ENST00000533346 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
NUP98-220ENST00000533346 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
NUP98-220ENST00000533346 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
NUP98-220ENST00000533346 A8MU10 97 aa3.69□□□□□ -1.82
NUP98-220ENST00000533346 MT1EP04732 61 aa3.66□□□□□ -1.82
NUP98-220ENST00000533346 PSPHP1O15172 72 aa3.65□□□□□ -1.83
NUP98-220ENST00000533346 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
NUP98-220ENST00000533346 A6NED7 52 aa3.63□□□□□ -1.83
NUP98-220ENST00000533346 UQCR11O14957 56 aa3.63□□□□□ -1.83
NUP98-220ENST00000533346 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
NUP98-220ENST00000533346 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
NUP98-220ENST00000533346 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
NUP98-220ENST00000533346 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
NUP98-220ENST00000533346 TNP1P09430 55 aa3.61□□□□□ -1.83
NUP98-220ENST00000533346 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
NUP98-220ENST00000533346 MT1GP13640 62 aa3.58□□□□□ -1.84
NUP98-220ENST00000533346 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
NUP98-220ENST00000533346 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
NUP98-220ENST00000533346 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
NUP98-220ENST00000533346 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
NUP98-220ENST00000533346 MT1LQ93083 61 aa3.51□□□□□ -1.85
NUP98-220ENST00000533346 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
NUP98-220ENST00000533346 MT1MQ8N339 61 aa3.48□□□□□ -1.85
NUP98-220ENST00000533346 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
NUP98-220ENST00000533346 K7ERS5 55 aa3.47□□□□□ -1.85
NUP98-220ENST00000533346 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
NUP98-220ENST00000533346 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
NUP98-220ENST00000533346 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
NUP98-220ENST00000533346 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
NUP98-220ENST00000533346 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
NUP98-220ENST00000533346 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
NUP98-220ENST00000533346 MT4P47944 62 aa3.38□□□□□ -1.87
NUP98-220ENST00000533346 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
NUP98-220ENST00000533346 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
NUP98-220ENST00000533346 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
NUP98-220ENST00000533346 ROMO1P60602 79 aa3.24□□□□□ -1.89
NUP98-220ENST00000533346 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
NUP98-220ENST00000533346 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
NUP98-220ENST00000533346 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
NUP98-220ENST00000533346 H3BS24 57 aa3.17□□□□□ -1.9
NUP98-220ENST00000533346 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
NUP98-220ENST00000533346 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
NUP98-220ENST00000533346 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
NUP98-220ENST00000533346 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
NUP98-220ENST00000533346 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
NUP98-220ENST00000533346 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
NUP98-220ENST00000533346 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
NUP98-220ENST00000533346 MT1AP04731 61 aa3□□□□□ -1.93
NUP98-220ENST00000533346 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
NUP98-220ENST00000533346 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
NUP98-220ENST00000533346 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
NUP98-220ENST00000533346 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
NUP98-220ENST00000533346 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
NUP98-220ENST00000533346 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
NUP98-220ENST00000533346 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
NUP98-220ENST00000533346 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
NUP98-220ENST00000533346 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
NUP98-220ENST00000533346 MT3P25713 68 aa2.75□□□□□ -1.97
NUP98-220ENST00000533346 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
NUP98-220ENST00000533346 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
NUP98-220ENST00000533346 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
NUP98-220ENST00000533346 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
NUP98-220ENST00000533346 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
NUP98-220ENST00000533346 LCE1EQ5T753 118 aa2.56□□□□□ -2
NUP98-220ENST00000533346 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
NUP98-220ENST00000533346 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NUP98-220ENST00000533346 INE1O15225 51 aa2.33□□□□□ -2.04
NUP98-220ENST00000533346 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
NUP98-220ENST00000533346 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
NUP98-220ENST00000533346 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
NUP98-220ENST00000533346 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
NUP98-220ENST00000533346 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NUP98-220ENST00000533346 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
NUP98-220ENST00000533346 PRM1P04553 51 aa1.63□□□□□ -2.15
NUP98-220ENST00000533346 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
NUP98-220ENST00000533346 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 45 ms