RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
GMDS-210ENST00000533279 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
GMDS-210ENST00000533279 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
GMDS-210ENST00000533279 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
GMDS-210ENST00000533279 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
GMDS-210ENST00000533279 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
GMDS-210ENST00000533279 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
GMDS-210ENST00000533279 KMT2DO14686 5537 aa4.32□□□□□ -1.72
GMDS-210ENST00000533279 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
GMDS-210ENST00000533279 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
GMDS-210ENST00000533279 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
GMDS-210ENST00000533279 SPRR2EP22531 72 aa4.19□□□□□ -1.74
GMDS-210ENST00000533279 SPRR2BP35325 72 aa4.19□□□□□ -1.74
GMDS-210ENST00000533279 SPRR2AP35326 72 aa4.19□□□□□ -1.74
GMDS-210ENST00000533279 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
GMDS-210ENST00000533279 MT1EP04732 61 aa4.17□□□□□ -1.74
GMDS-210ENST00000533279 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
GMDS-210ENST00000533279 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
GMDS-210ENST00000533279 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
GMDS-210ENST00000533279 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
GMDS-210ENST00000533279 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
GMDS-210ENST00000533279 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
GMDS-210ENST00000533279 NEBP20929 6669 aa4.06□□□□□ -1.76
GMDS-210ENST00000533279 MT1GP13640 62 aa4.05□□□□□ -1.76
GMDS-210ENST00000533279 SPRR2DP22532 72 aa4.05□□□□□ -1.76
GMDS-210ENST00000533279 MT1LQ93083 61 aa4.05□□□□□ -1.76
GMDS-210ENST00000533279 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
GMDS-210ENST00000533279 MT1MQ8N339 61 aa3.94□□□□□ -1.78
GMDS-210ENST00000533279 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
GMDS-210ENST00000533279 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.79
GMDS-210ENST00000533279 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.79
GMDS-210ENST00000533279 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
GMDS-210ENST00000533279 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
GMDS-210ENST00000533279 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
GMDS-210ENST00000533279 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
GMDS-210ENST00000533279 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
GMDS-210ENST00000533279 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
GMDS-210ENST00000533279 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
GMDS-210ENST00000533279 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
GMDS-210ENST00000533279 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
GMDS-210ENST00000533279 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
GMDS-210ENST00000533279 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
GMDS-210ENST00000533279 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
GMDS-210ENST00000533279 MT4P47944 62 aa3.48□□□□□ -1.85
GMDS-210ENST00000533279 MT1AP04731 61 aa3.47□□□□□ -1.85
GMDS-210ENST00000533279 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
GMDS-210ENST00000533279 MT3P25713 68 aa3.45□□□□□ -1.86
GMDS-210ENST00000533279 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
GMDS-210ENST00000533279 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
GMDS-210ENST00000533279 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
GMDS-210ENST00000533279 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
GMDS-210ENST00000533279 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
GMDS-210ENST00000533279 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
GMDS-210ENST00000533279 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
GMDS-210ENST00000533279 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
GMDS-210ENST00000533279 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
GMDS-210ENST00000533279 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
GMDS-210ENST00000533279 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
GMDS-210ENST00000533279 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
GMDS-210ENST00000533279 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
GMDS-210ENST00000533279 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
GMDS-210ENST00000533279 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
GMDS-210ENST00000533279 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
GMDS-210ENST00000533279 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
GMDS-210ENST00000533279 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
GMDS-210ENST00000533279 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
GMDS-210ENST00000533279 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
GMDS-210ENST00000533279 INE1O15225 51 aa2.67□□□□□ -1.98
GMDS-210ENST00000533279 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
GMDS-210ENST00000533279 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
GMDS-210ENST00000533279 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
GMDS-210ENST00000533279 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
GMDS-210ENST00000533279 PRM1P04553 51 aa2.3□□□□□ -2.04
GMDS-210ENST00000533279 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
GMDS-210ENST00000533279 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
GMDS-210ENST00000533279 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
GMDS-210ENST00000533279 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
GMDS-210ENST00000533279 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms