RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 DEFB105AQ8NG35 78 aa2.66□□□□□ -1.98
ATM-216ENST00000531525 SPINK7P58062 85 aa2.64□□□□□ -1.99
ATM-216ENST00000531525 TRBV7-4A0A0J9YYF1 115 aa2.62□□□□□ -1.99
ATM-216ENST00000531525 MT2AP02795 61 aa2.62□□□□□ -1.99
ATM-216ENST00000531525 MT1FP04733 61 aa2.61□□□□□ -1.99
ATM-216ENST00000531525 ATP5EP2Q5VTU8 51 aa2.61□□□□□ -1.99
ATM-216ENST00000531525 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
ATM-216ENST00000531525 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
ATM-216ENST00000531525 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
ATM-216ENST00000531525 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
ATM-216ENST00000531525 LCE1CQ5T751 118 aa2.58□□□□□ -2
ATM-216ENST00000531525 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
ATM-216ENST00000531525 NEBP20929 6669 aa2.58□□□□□ -2
ATM-216ENST00000531525 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
ATM-216ENST00000531525 A0A1B0GU69 56 aa2.55□□□□□ -2
ATM-216ENST00000531525 UBL5Q9BZL1 73 aa2.55□□□□□ -2
ATM-216ENST00000531525 NREPQ16612 68 aa2.54□□□□□ -2
ATM-216ENST00000531525 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
ATM-216ENST00000531525 NDUFB1O75438 58 aa2.49□□□□□ -2.01
ATM-216ENST00000531525 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
ATM-216ENST00000531525 K7EQZ3 153 aa2.47□□□□□ -2.01
ATM-216ENST00000531525 KMT2DO14686 5537 aa2.45□□□□□ -2.02
ATM-216ENST00000531525 MMP24-AS1A0A0U1RRL7 71 aa2.44□□□□□ -2.02
ATM-216ENST00000531525 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
ATM-216ENST00000531525 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
ATM-216ENST00000531525 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
ATM-216ENST00000531525 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
ATM-216ENST00000531525 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
ATM-216ENST00000531525 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
ATM-216ENST00000531525 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
ATM-216ENST00000531525 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
ATM-216ENST00000531525 MT1BP07438 61 aa2.32□□□□□ -2.04
ATM-216ENST00000531525 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
ATM-216ENST00000531525 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
ATM-216ENST00000531525 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
ATM-216ENST00000531525 SPRR2EP22531 72 aa2.28□□□□□ -2.04
ATM-216ENST00000531525 SPRR2BP35325 72 aa2.28□□□□□ -2.04
ATM-216ENST00000531525 SPRR2AP35326 72 aa2.28□□□□□ -2.04
ATM-216ENST00000531525 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
ATM-216ENST00000531525 SPRR2GQ9BYE4 73 aa2.27□□□□□ -2.05
ATM-216ENST00000531525 CRIPTQ9P021 101 aa2.26□□□□□ -2.05
ATM-216ENST00000531525 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
ATM-216ENST00000531525 SPRR2DP22532 72 aa2.22□□□□□ -2.05
ATM-216ENST00000531525 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
ATM-216ENST00000531525 A0A0D9SG42 100 aa2.17□□□□□ -2.06
ATM-216ENST00000531525 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
ATM-216ENST00000531525 S4R3F8 94 aa2.17□□□□□ -2.06
ATM-216ENST00000531525 MT1XP80297 61 aa2.14□□□□□ -2.07
ATM-216ENST00000531525 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
ATM-216ENST00000531525 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
ATM-216ENST00000531525 H0YAA0 97 aa2.1□□□□□ -2.07
ATM-216ENST00000531525 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
ATM-216ENST00000531525 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
ATM-216ENST00000531525 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
ATM-216ENST00000531525 M0QZ58 72 aa2□□□□□ -2.09
ATM-216ENST00000531525 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
ATM-216ENST00000531525 MT4P47944 62 aa1.95□□□□□ -2.1
ATM-216ENST00000531525 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
ATM-216ENST00000531525 MT1EP04732 61 aa1.91□□□□□ -2.1
ATM-216ENST00000531525 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
ATM-216ENST00000531525 MT1GP13640 62 aa1.85□□□□□ -2.11
ATM-216ENST00000531525 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
ATM-216ENST00000531525 MT1MQ8N339 61 aa1.83□□□□□ -2.12
ATM-216ENST00000531525 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
ATM-216ENST00000531525 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
ATM-216ENST00000531525 MT1LQ93083 61 aa1.78□□□□□ -2.12
ATM-216ENST00000531525 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
ATM-216ENST00000531525 TNP1P09430 55 aa1.76□□□□□ -2.13
ATM-216ENST00000531525 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
ATM-216ENST00000531525 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.13
ATM-216ENST00000531525 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
ATM-216ENST00000531525 MT1AP04731 61 aa1.51□□□□□ -2.17
ATM-216ENST00000531525 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
ATM-216ENST00000531525 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
ATM-216ENST00000531525 PRM1P04553 51 aa1.25□□□□□ -2.21
ATM-216ENST00000531525 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
ATM-216ENST00000531525 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
ATM-216ENST00000531525 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms