RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
RELA-217ENST00000531484 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
RELA-217ENST00000531484 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
RELA-217ENST00000531484 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
RELA-217ENST00000531484 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
RELA-217ENST00000531484 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
RELA-217ENST00000531484 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
RELA-217ENST00000531484 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
RELA-217ENST00000531484 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
RELA-217ENST00000531484 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
RELA-217ENST00000531484 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
RELA-217ENST00000531484 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
RELA-217ENST00000531484 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
RELA-217ENST00000531484 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
RELA-217ENST00000531484 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
RELA-217ENST00000531484 MT1EP04732 61 aa3.61□□□□□ -1.83
RELA-217ENST00000531484 MT1LQ93083 61 aa3.59□□□□□ -1.83
RELA-217ENST00000531484 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
RELA-217ENST00000531484 NEBP20929 6669 aa3.58□□□□□ -1.84
RELA-217ENST00000531484 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
RELA-217ENST00000531484 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
RELA-217ENST00000531484 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
RELA-217ENST00000531484 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
RELA-217ENST00000531484 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
RELA-217ENST00000531484 SPRR2EP22531 72 aa3.47□□□□□ -1.85
RELA-217ENST00000531484 SPRR2BP35325 72 aa3.47□□□□□ -1.85
RELA-217ENST00000531484 SPRR2AP35326 72 aa3.47□□□□□ -1.85
RELA-217ENST00000531484 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
RELA-217ENST00000531484 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
RELA-217ENST00000531484 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
RELA-217ENST00000531484 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
RELA-217ENST00000531484 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
RELA-217ENST00000531484 MT1MQ8N339 61 aa3.39□□□□□ -1.87
RELA-217ENST00000531484 MT1GP13640 62 aa3.38□□□□□ -1.87
RELA-217ENST00000531484 SPRR2DP22532 72 aa3.33□□□□□ -1.88
RELA-217ENST00000531484 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
RELA-217ENST00000531484 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
RELA-217ENST00000531484 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
RELA-217ENST00000531484 MT3P25713 68 aa3.21□□□□□ -1.9
RELA-217ENST00000531484 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
RELA-217ENST00000531484 LCE1DQ5T752 114 aa3.09□□□□□ -1.92
RELA-217ENST00000531484 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
RELA-217ENST00000531484 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
RELA-217ENST00000531484 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
RELA-217ENST00000531484 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
RELA-217ENST00000531484 MT1AP04731 61 aa3.03□□□□□ -1.92
RELA-217ENST00000531484 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
RELA-217ENST00000531484 MT4P47944 62 aa2.98□□□□□ -1.93
RELA-217ENST00000531484 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
RELA-217ENST00000531484 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
RELA-217ENST00000531484 PRM1P04553 51 aa2.94□□□□□ -1.94
RELA-217ENST00000531484 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RELA-217ENST00000531484 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
RELA-217ENST00000531484 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
RELA-217ENST00000531484 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
RELA-217ENST00000531484 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
RELA-217ENST00000531484 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
RELA-217ENST00000531484 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
RELA-217ENST00000531484 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
RELA-217ENST00000531484 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
RELA-217ENST00000531484 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
RELA-217ENST00000531484 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
RELA-217ENST00000531484 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
RELA-217ENST00000531484 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
RELA-217ENST00000531484 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
RELA-217ENST00000531484 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
RELA-217ENST00000531484 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
RELA-217ENST00000531484 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
RELA-217ENST00000531484 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
RELA-217ENST00000531484 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
RELA-217ENST00000531484 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
RELA-217ENST00000531484 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
RELA-217ENST00000531484 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
RELA-217ENST00000531484 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
RELA-217ENST00000531484 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
RELA-217ENST00000531484 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
RELA-217ENST00000531484 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
RELA-217ENST00000531484 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms